Pairwise Alignments

Query, 1974 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 731 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  207 bits (528), Expect = 3e-57
 Identities = 177/528 (33%), Positives = 258/528 (48%), Gaps = 84/528 (15%)

Query: 1200 RKSEELLKAQQEKLTTTNEALEEKAEQLEKQNIEVERKNREVVFAKAALEEKAEQLALTS 1259
            R+S+E L+A +++LT         AE+L+    + E        A+ A E         S
Sbjct: 151  RRSQEELRAAEDQLTRLAAETFALAEKLDGAREDAEA-------ARIAAEN-------AS 196

Query: 1260 KYKSQFLANMSHELRTPLNSLLILSKLLADNPDTNLSDRQVEFARTIHSAGSDLLGLIND 1319
              KS+FLA MSHELRTP+ +++ +  LL     T L+D+Q  F +T+ S+   L+ ++ND
Sbjct: 197  SAKSRFLAMMSHELRTPMTAVIGMGDLLMG---TGLNDQQKAFVKTLRSSAGTLMTILND 253

Query: 1320 ILDLSKIESGTVTLEIGEVVLGDLRNHVERTFSQLAQEKKLDFAIEMDEALPASIQTDEK 1379
            +LD SKIE+G +TLE  +  L  L + V + F   A  K L  +  + +  P  I+ D  
Sbjct: 254  VLDFSKIEAGQLTLEEIDFSLPRLVDDVVQLFLVRAAAKGLSLSASIADDTPRHIRGDPT 313

Query: 1380 RLAQVLNNLLSNAFKFTDAGGITFRVAQATEGWSA-------AHPTLDAASS----VLAF 1428
            RL QVL NL+SNA KFTD G I   V      WS        A P   AA +     L F
Sbjct: 314  RLRQVLFNLVSNAIKFTDRGTIEIAV------WSPDPPADPPADPPAGAAPADAPVTLRF 367

Query: 1429 TVIDTGIGIPEDKQRIIFEAFQQADGTTSRKYGGTGLGLSISREIARLLGGEIRVASTPG 1488
             V D GIG+  +++  +F+AF QAD +TSRKYGGTGLGL+I + +   +GGEI VASTPG
Sbjct: 368  EVEDNGIGMTPEQRARLFDAFVQADVSTSRKYGGTGLGLAICKRLVEAMGGEITVASTPG 427

Query: 1489 RGSAFTLFVPRSYDIVAEPVAQFGTPVIAAASAAMPTTALLPKRTETATRPVVASGPQEG 1548
            RGS F  F   S    A PV + G      A  A+P  A  P+ T+   R          
Sbjct: 428  RGSTFR-FSILSRLAEAPPVGELG------ARPALPGAAETPEPTQVPLR---------- 470

Query: 1549 LALLDMQPAGDDRERLRPGEPVVLIVEDDNTFASILIDLAREKGFRTILSSGGSAALPLA 1608
                                  +L+ ED++    +++ +    G R    + G AAL   
Sbjct: 471  ----------------------LLLAEDNDINRMLVVAMMSRIGHRIDAVTDGRAALDAL 508

Query: 1609 RKYRPDAVLLDIGLPDMDGWALLDLLKR-DPQTRHIPVHVISAK--DERRRG-LAMGAFD 1664
                 DA++LD+ +P +DG +    ++R D     IP+  +SA    E R G LA G   
Sbjct: 509  VAADYDALILDMEMPVLDGRSTARAIRRMDGPVARIPIVGLSADALPEHRDGHLAAGLDA 568

Query: 1665 YSEKPVEREAIFDALNRV---KSFRERDHRRLLVVEKDSPQPGGVAAL 1709
            Y  KP++    +D LN V    + R ++ R + V  + + + G  +AL
Sbjct: 569  YLTKPID----WDQLNAVLVDLATRPQEGRVVPVPSRPATEGGHFSAL 612



 Score = 57.4 bits (137), Expect = 7e-12
 Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)

Query: 1836 DPSLAGKRVLVIDDDIRNIFSLASVME--AHKIEVLHAESGREGIERLRADPGVDVVLVD 1893
            +P+    R+L+ +D+  N   + ++M    H+I+ +    GR  ++ L A    D +++D
Sbjct: 463  EPTQVPLRLLLAEDNDINRMLVVAMMSRIGHRIDAV--TDGRAALDALVA-ADYDALILD 519

Query: 1894 IMMPEMDGYETMRTIRSID-EFRALPMIAVTAKAMKGDRDKCIEAGATDYIAKPVDIDHL 1952
            + MP +DG  T R IR +D     +P++ ++A A+   RD  + AG   Y+ KP+D D L
Sbjct: 520  MEMPVLDGRSTARAIRRMDGPVARIPIVGLSADALPEHRDGHLAAGLDAYLTKPIDWDQL 579

Query: 1953 LSLL 1956
             ++L
Sbjct: 580  NAVL 583



 Score = 31.2 bits (69), Expect = 5e-04
 Identities = 20/61 (32%), Positives = 29/61 (47%)

Query: 1692 RLLVVEKDSPQPGGVAALIGNGDVETHTVTSIEAAMAALSADHFDCMVLDLSSPTLAGPV 1751
            RLL+ E +      V A++         VT   AA+ AL A  +D ++LD+  P L G  
Sbjct: 470  RLLLAEDNDINRMLVVAMMSRIGHRIDAVTDGRAALDALVAADYDALILDMEMPVLDGRS 529

Query: 1752 T 1752
            T
Sbjct: 530  T 530