Pairwise Alignments

Query, 877 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 556 a.a., putative sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 6e-59
 Identities = 132/365 (36%), Positives = 196/365 (53%), Gaps = 6/365 (1%)

Query: 511 ARERFLAAASHDLRQPVQALLLLSDLLMKETLAPGAQRMAEQIQSSLGGLGGMLDGMLDI 570
           +++++LAAASHDL QP+ A  LL   L +  L      + E+   +L G   +L  +LDI
Sbjct: 195 SKDKYLAAASHDLLQPLNAARLLISTLRERPLPEAEHVLVERTHQALEGAEDLLTDLLDI 254

Query: 571 SKLEAGLVAPNPESVDIAALLARLHGEFAPAAEKAGQALRLVAPPLTTRTDPRLLERVLR 630
           S+L+   V P+     +  L A L  EF+P AE AG  L          TD RLL R+LR
Sbjct: 255 SRLDQAAVKPDVAVYRLDELFAPLVSEFSPVAEAAGLKLHARIADYAISTDLRLLTRILR 314

Query: 631 ALLANALHFAPGGRVLIGARQRGDHVQIEVWDTGIGIADQHIDRIFQDFYQVGNAARDRR 690
             L+NA  +   GR+L+GAR+RG H+++EVWDTG GIA   +  IF +F Q+       R
Sbjct: 315 NFLSNACRYTEEGRILLGARRRGGHLRLEVWDTGRGIAQDRLQDIFLEFNQLDVGRAADR 374

Query: 691 EGLGLGLSIAKRLVTMLDGTIDVTSSLGRGSRFTVSLPLTETRPDMTDRSGSAGRSGADD 750
           +G+GLGL+I +R+  +L   I+V S LGRGS F++ +PL +  P    ++      G D 
Sbjct: 375 KGVGLGLAIVERIAKILGYRIEVRSWLGRGSVFSIEVPLGKEVPLAVHQAVPLPSVG-DP 433

Query: 751 EAGRLVMLVEDDAVIRMALVLMLEDWNYRVAEAGSGAEAEQLLGELIESGEEPDLILADY 810
             GR +++++++  I  ++  +L  W   V  A    + E  L  L   G  P+LILADY
Sbjct: 434 LPGRRLLVLDNEVSILESMGALLGQWGCEVVTA---TDREGAL--LALQGRAPELILADY 488

Query: 811 RLPEGTTGLMVMDMVRRRLSRDIPGVLLTGDTSADRLREAAGAQCALLHKPIQPGRLHDT 870
            L  G  G  V+  +R   +  IP V++T D S    R        LL+KP++PG+L   
Sbjct: 489 HLDHGVVGCEVVRYLREHFATAIPAVIITADRSDQCRRGLQKLGAPLLNKPVKPGKLRAV 548

Query: 871 LAAAL 875
           L+  L
Sbjct: 549 LSQLL 553



 Score = 25.4 bits (54), Expect = 0.010
 Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 13/156 (8%)

Query: 52  ELRGAQQALEASRLQYLQLFQSVPLACLAVNAAGIVGEANAAAERQFGLP-----MLRLK 106
           EL      LEA R +Y  LF++        +    +  AN A  R  G       +  L 
Sbjct: 30  ELSARLDELEAERNRYKWLFENAVHGIFQASLQDGMRAANPALARMLGYDDPQAVLFSLT 89

Query: 107 GRPLTLLLDSVDHGRLFTALGRLRDHGDWVRQEFRYLGPHGTIIDGLTDARRVTLDDSDR 166
                L     +  +  TA+   R+H      E R     G+ +D L +   + L     
Sbjct: 90  DLAANLFDGGAEELQAITAV-LAREHS-LHGYETRLRRKDGSHLDVLMN---LLLKPGHE 144

Query: 167 GDVLLTITDLTERNAWLREVQQARDDAER---ARAD 199
           G V   + D+TER    + +QQ  D+ E+   AR D
Sbjct: 145 GLVEGFVADITERKLAQQRLQQLNDELEQRVAARTD 180