Pairwise Alignments

Query, 235 a.a., Outer membrane protein W from Azospirillum sp. SherDot2

Subject, 212 a.a., outer membrane protein OmpW from Escherichia coli ECRC98

 Score =  107 bits (267), Expect = 2e-28
 Identities = 79/237 (33%), Positives = 109/237 (45%), Gaps = 30/237 (12%)

Query: 1   MTILSRAAAALLATSALVAIASPSLAQDFKGKSAGDIVVRARGLAVLPQEKGTINNTTLG 60
           +T+ + A   LL+ SA                 AG+  +RA    V P E       TLG
Sbjct: 4   LTVAALAVTTLLSGSAFA-------------HEAGEFFMRAGSATVRPTEGA---GGTLG 47

Query: 61  DVGSAKVGNDYIPEVDFTYFFTDNIAAELIAGTS-RHRVKGNLIAAAGGVTEIGKVSLLP 119
            +G   V N+    + FTY  TDNI  EL+A T  RH++            +I  V  LP
Sbjct: 48  SLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKI------GTRATGDIATVHHLP 101

Query: 120 PTLTVQYHF-LPKERISPYVGAGINYTLFYNEDAAESPNAGGLRITDTNYKNRFGWALQA 178
           PTL  Q++F     +  PYVGAGINYT F++    +     GL  +D + K+ +G A Q 
Sbjct: 102 PTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGL--SDLSLKDSWGAAGQV 159

Query: 179 GVDVALTGNWSLNFDVKKVFLKTDVTANARLGSAVLPVTSKVTLDPWLVGVGVGYRF 235
           GVD  +  +W +N  V  +    D+   A+  S V  V   V LDPW+     GYRF
Sbjct: 160 GVDYLINRDWLVNMSVWYM----DIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF 212