Pairwise Alignments

Query, 974 a.a., DNA polymerase I from Azospirillum sp. SherDot2

Subject, 934 a.a., DNA polymerase I (EC 2.7.7.7) from Pseudomonas fluorescens GW456-L13

 Score =  685 bits (1768), Expect = 0.0
 Identities = 399/963 (41%), Positives = 567/963 (58%), Gaps = 53/963 (5%)

Query: 31  LYLVDGSGFIFRAFHALPMLTRPDGTPVNAVLGFSNMLLKLLADAKAEAVAVVFDSKRLN 90
           L LVDGS +++RAFHALP LT   G P  AV G  NML  L         AVVFD+K   
Sbjct: 6   LVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAKGGT 65

Query: 91  FRNEFYPDYKAHRPEPPEELKPQFALIREATEAFCLPCLELEGFEADDLIATYARLAQEA 150
           FR+E + +YKA+RP  P++++ Q   + ++  A   P L +EG EADD+I T AR +  A
Sbjct: 66  FRDEMFAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSSAAA 125

Query: 151 GRPVTIVSSDKDLMQLVRPGVGMFDPMKNKAIGPDEVFEKFGVPPDKVVDVQALAGDSVD 210
            RPV I + DKD+ QLV   + + + M   ++  + V EKFGV P++++D  AL GDS D
Sbjct: 126 DRPVIISTGDKDMAQLVDGHITLVNTMTGSSMDVEGVKEKFGVAPEQIIDYLALMGDSSD 185

Query: 211 NVPGVPGIGVKTAAQLITEY-GDLEALLANAEKIKQPARR------QKLIEFADLARISR 263
           N+PGVPGIG KTA+ L+    G L  L A  + +     R       KL E  ++A +S 
Sbjct: 186 NIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEMAFLSY 245

Query: 264 RLVLLDENVPPPKPLDDLRVREPDHQRLIDFLRAQGFRSIVSRVEMEMQKDGRIADGASG 323
           +L  +  +VP    LDDL++   D  +L +      F+S ++    ++ +D +  + ++ 
Sbjct: 246 QLATIKVDVPLDVGLDDLKMGAEDPAKLYELYSLLEFKSWLN----DLDRDAKRLELSAA 301

Query: 324 SLPAPGS--MPTPAAKSPATAESPAAEDRPARKTVLNVPEVRYELVQDADALRRWVERAR 381
           + PAP +     P A++PA A                  E  YE + D      W+E+  
Sbjct: 302 AEPAPAADLFSEPEAEAPAVAA-----------------EAAYETILDQARFDAWLEKLN 344

Query: 382 ETGVLAVDTETDSLTPATATLVGVSLSTEPGIACYIPLAHKAEGAAAAGQLDFEAPTPPA 441
              + A DTET  +    A LVG+S + +   A YIPL H   G              P 
Sbjct: 345 NAKLFAFDTETTGIDAQQAQLVGLSFAVQANEAAYIPLTHSYIGV-------------PQ 391

Query: 442 QIPTDEAMAILKDVLEDRSVLKIGHNFKFDHQLFAR--------NGIAVSPVD-DSMLIS 492
           Q+  D  +  LK +LED   LK+G + KFD  + A         NGI V  +  D+ML S
Sbjct: 392 QLDRDTVLRALKPILEDPDKLKVGQHAKFDMNILANCAIGGDQDNGITVRGIAFDTMLES 451

Query: 493 YVLEGGSHGHGMDELAELHLAYTPIPFKEVCGTGKNQITFDRVPLDKALAYAAEDADITL 552
           YVL   +  H MD LA+ +L +T + F+++ G G  Q+TFD++ L++A  YAAEDADITL
Sbjct: 452 YVLNSTATRHDMDSLAQKYLDHTTVSFQDIAGKGVKQLTFDQIALEQAGPYAAEDADITL 511

Query: 553 RLWTLLKPRL-VDDRMVTVYETLDRPLVPVVADMERAGVHIDKKALSDLSQSLSLRLAEI 611
           RL   L  +L     + +V   ++ PLVPV+A +ER G  +D   L   S  L  ++  +
Sbjct: 512 RLHHALFEKLSAIPSLASVLTDIEIPLVPVLARIERQGALVDAALLGVQSIELGDKMVAL 571

Query: 612 EKDVHALAGQSFNIGSPKQLGEILFDTLKLGTGKKGKTGAYSTDSSVLEELAEQGHTIAQ 671
           E++   +AG+ FN+GSPKQLG IL++ L L   KK   G  ST   VL +LAE  + + +
Sbjct: 572 EREAFEIAGEEFNLGSPKQLGVILYEKLGLPVLKKTAKGQPSTAEEVLAKLAEDDYRLPK 631

Query: 672 RVLDWRQLAKLKSTYTDALQEKISPVTGRVHTAFALAATNTGRLSSTDPNLQNIPVRTEE 731
            ++++R ++KLKSTYTD L E+I+P TGR+HT++  A  +TGRLSS+DPNLQNIPVRT E
Sbjct: 632 VLMEYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVASTGRLSSSDPNLQNIPVRTAE 691

Query: 732 GKKIRRAFVASPGYKLLSVDYSQIELRLVAEMANIQALKDAFRDGLDIHAATAAQVFGIP 791
           G++IR+AFVA  GYKLL+ DYSQIELR++A ++  + L +AFR  LD+H ATAA+VF + 
Sbjct: 692 GRRIRQAFVAPVGYKLLAADYSQIELRIMAHLSRDEGLMNAFRHNLDVHTATAAEVFKVE 751

Query: 792 LEQMTPDIRRKAKAINFGIIYGISGFGLGRQLGIAPGEANAFIKTYLERFHELKVWMEAT 851
           L ++T + RR AKAINFG+IYG+    LG+ +G+    A A+I TY  R+  ++ +M+ T
Sbjct: 752 LAEVTSNQRRSAKAINFGLIYGMGAQKLGKDIGVDTKTAKAYIDTYFARYPGVRQYMDRT 811

Query: 852 KAFARQHGYVATLFGRRCYMPGIQEKNAARRAFAERQAINAPIQGTAADIMKRAMNRMPG 911
           +A A + GYV T FGRR Y+P I       RA AER AINAP+QGTAADI+K+AM  +  
Sbjct: 812 RAQAAEQGYVETFFGRRLYLPDINSNKPQERAAAERTAINAPMQGTAADIIKKAMVAVDN 871

Query: 912 ALAAAGSSARMLLQVHDELLFEVPEAEAEDAARIVREVMEGAATLGVPLVAEAGIGDNWE 971
            L A+G  A+++LQVHDEL+ EV E   +     +R  M  AA L VPL+ E G+G+NW+
Sbjct: 872 WLTASGLDAKVILQVHDELVLEVREDLVDQVRDEIRVHMSEAAKLDVPLLVEVGVGNNWD 931

Query: 972 EAH 974
           EAH
Sbjct: 932 EAH 934