Pairwise Alignments

Query, 974 a.a., DNA polymerase I from Azospirillum sp. SherDot2

Subject, 998 a.a., DNA polymerase I from Agrobacterium fabrum C58

 Score =  959 bits (2480), Expect = 0.0
 Identities = 529/998 (53%), Positives = 675/998 (67%), Gaps = 54/998 (5%)

Query: 28  GSGLYLVDGSGFIFRAFHALPMLTRP-DGTPVNAVLGFSNMLLKLLADAKAEAV------ 80
           G  L+LVDGSGFIFRAFHA+P L R  DG PVNAV GF NML KLL DA+   V      
Sbjct: 4   GDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVTPTH 63

Query: 81  -AVVFDSKRLNFRNEFYPDYKAHRPEPPEELKPQFALIREATEAFCLPCLELEGFEADDL 139
            AV+FD     FRNE Y  YKA+R  PPE+L PQF LIREAT AF LPC+E EGFEADD+
Sbjct: 64  FAVIFDYSSKTFRNELYDLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEADDI 123

Query: 140 IATYARLAQEAGRPVTIVSSDKDLMQLVRPGVGMFDPMKNKAIGPDEVFEKFGVPPDKVV 199
           IATYAR A+  G  VTI+SSDKDLMQLV   V M+D MK+K IG  +V EK+GV P+K++
Sbjct: 124 IATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVIEKWGVGPEKMI 183

Query: 200 DVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDLEALLANAEKIKQPARRQKLIEFADLA 259
           D+QA+ GDS DNVPG+PGIG KTAAQL+ EYGDL+ LLA A +IKQ  RR+ +I  A+LA
Sbjct: 184 DLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANAELA 243

Query: 260 RISRRLVLLDENVPPPKPLDDLRVREPDHQRLIDFLRAQGFRSIVSRVEMEMQKDGRIAD 319
           R+SR+LV L  +VP  + L++L +   +  +LI FL+A  F ++  RV      D    D
Sbjct: 244 RLSRQLVALRTDVPLEQSLEELVLEPQNGPKLIAFLKAMEFTTLTRRVAEATDSDASAID 303

Query: 320 GAS-----------GSLPAP-----GSMPTPAAKSPATAESPA----------AEDRPAR 353
            A+             L AP     G +       PA+A +PA          A+   AR
Sbjct: 304 PANVPVQWGADAHGPDLDAPAAAMAGDVSAEGNNRPASAVAPAKRMIGEGSTPADLTTAR 363

Query: 354 KTVLNVPEV---RYELVQDADALRRWVERARETGVLAVDTETDSLTPATATLVGVSLSTE 410
           + +    ++    Y  ++D   L  W+  ARE GV+A DTET SL P  A LVG SL+  
Sbjct: 364 QALFAATKIDTTAYTAIRDIATLDLWIAAAREAGVVAFDTETTSLDPMQAELVGFSLAIA 423

Query: 411 PG---------IACYIPLAHKAEGAAAAGQLDFEA-PTPPAQIPTDEAMAILKDVLEDRS 460
                       A Y+PL HK     + G L  +       Q P  EA+  LKD+LED +
Sbjct: 424 DNGKDASGTDIRAAYVPLTHKT---GSGGDLFSDGIKLAEGQAPFAEALERLKDLLEDEA 480

Query: 461 VLKIGHNFKFDHQLFARNGIAVSPVDDSMLISYVLEGGSHGHGMDELAELHLAYTPIPFK 520
           VLK+  N K+D+ L  R+G+ +   DD+MLISYVLE G   HGMD L+E  L +TPI +K
Sbjct: 481 VLKVAQNLKYDYLLMKRHGVVMRSFDDTMLISYVLEAGKTTHGMDTLSERWLGHTPIAYK 540

Query: 521 EVCGTGKNQITFDRVPLDKALAYAAEDADITLRLWTLLKPRLVDDRMVTVYETLDRPLVP 580
           +V G+GK+ ITFD V +DKA AYAAEDAD+TLRLW  LKPRLV +R+  VYE L+RPLVP
Sbjct: 541 DVTGSGKSSITFDFVNIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERPLVP 600

Query: 581 VVADMERAGVHIDKKALSDLSQSLSLRLAEIEKDVHALAGQSFNIGSPKQLGEILFDTLK 640
           V+A ME  G+ +D++ LS LS  L+ + A  E++++ LAG+ FNIGSPKQLG+ILF  + 
Sbjct: 601 VLAHMEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFNIGSPKQLGDILFGRMG 660

Query: 641 LGTGKKGKTGAYSTDSSVLEELAEQGHTIAQRVLDWRQLAKLKSTYTDALQEKISPVTGR 700
           L  G K KTG +ST + VLE+LA +G  + ++++DWRQL KLKSTYTDAL   I P T R
Sbjct: 661 LPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPSYIHPETKR 720

Query: 701 VHTAFALAATNTGRLSSTDPNLQNIPVRTEEGKKIRRAFVASPGYKLLSVDYSQIELRLV 760
           VHT++ALA+T TGRLSS++PNLQNIPVRT EG+KIR AF+++PG+KLLS DYSQIELR++
Sbjct: 721 VHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVL 780

Query: 761 AEMANIQALKDAFRDGLDIHAATAAQVFGIPLEQMTPDIRRKAKAINFGIIYGISGFGLG 820
           A +A+I  L++AF +G+DIHA TA+++FG+P+E M  ++RR+AKAINFGIIYGIS FGL 
Sbjct: 781 AHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLA 840

Query: 821 RQLGIAPGEANAFIKTYLERFHELKVWMEATKAFARQHGYVATLFGRRCYMPGIQEKNAA 880
            QL IA  EA  +IK Y ERF  ++ +MEATKAFAR++GYV T+FGRR + P I+  N +
Sbjct: 841 NQLSIARSEAGDYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNPS 900

Query: 881 RRAFAERQAINAPIQGTAADIMKRAMNRMPGALAAAGSSARMLLQVHDELLFEVPEAEAE 940
            +AF ER AINAPIQG+AADI++RAM R+  AL A   SARMLLQVHDEL+FEV EAE E
Sbjct: 901 VKAFNERAAINAPIQGSAADIIRRAMIRIEPALEAEKLSARMLLQVHDELIFEVEEAEIE 960

Query: 941 DAARIVREVMEGAA----TLGVPLVAEAGIGDNWEEAH 974
               +V  VME AA    ++ VPL  +A   DNW+EAH
Sbjct: 961 KTLPVVVSVMEDAAMPAISMRVPLKVDARAADNWDEAH 998