Pairwise Alignments

Query, 755 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1542 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  238 bits (607), Expect = 2e-66
 Identities = 198/661 (29%), Positives = 313/661 (47%), Gaps = 72/661 (10%)

Query: 3   KKTDDPDSDFNNLIRHIQESRGIDFRGYKRTSLERRIRRRMEEVGCDGFAAYHAFLEAHP 62
           ++ D P++  + ++  +      D R YK  SL RRI RRM          Y +FL  HP
Sbjct: 207 EQPDVPNAALSAILDLLNAQTKRDHRAYKPRSLARRIERRMGIHHIADMPEYRSFLGTHP 266

Query: 63  QEFVDLLNTVLINVTSFFRDGEAWEVMRREVVLRMLERKGDQAPIRIWSVGCASGEEPYS 122
            E   L   +LI+VT FFRD  A+EV+  + +  ++  +    PIR+W   CA+GEE YS
Sbjct: 267 AEIELLSRDILISVTRFFRDDPAFEVLAGDFIAPLVRNRPAGKPIRVWVPACATGEEAYS 326

Query: 123 LAMMFAEALGTAEFCRRVKIYATDLDDAALNTARHATYGPRDVESVPEPLLERYFERIGN 182
           +A++  EA   +      +++ATD+D  AL  AR   Y       V    L+RYF +   
Sbjct: 327 IAILLMEACAQSGSSPDFRVFATDVDSRALTIARTGLYPETIAVDVSVERLDRYFTKAEG 386

Query: 183 HYVFQRDLRKCVIFGRHNVVSDAPISRIDLLICRNLLIYLEADTQGVVLPRLHYALVNDG 242
            Y   + LR  V F +H+++SD P S++DL+ CRN+LIY+E D Q  +    ++ALV +G
Sbjct: 387 GYKVAKPLRDAVSFAQHDLLSDPPFSKLDLISCRNMLIYIEPDVQKSIFALFNFALVENG 446

Query: 243 FLFLGKAETQLARSRMFEPVDLKSRIFAKVPQEWRRSAGGSLSLANDAGSPRVNQQVRLL 302
            L LG AE+  ARS +F P+  K R++ K+      + G ++++   +G   +   V   
Sbjct: 447 GLLLGTAESIDARSDLFAPLSKKWRLYRKI----GTTRGSAVTVPPTSGRSAIT--VPAP 500

Query: 303 ESIVDGSSTGYLAVNA-------EGVLVFANTHARRLF----DVEESDIGRPFQDLTISY 351
            + + G+S   +   A         VL+      + LF    +  +   G P  DLT   
Sbjct: 501 PTSLRGTSPADIIRQALLLEYAPAAVLIDGLHRVQYLFGPTGEFLDLPTGEPPWDLTAMT 560

Query: 352 R---PTELRSRIEEVRNSGRMVRIEHQPFTRPGAEPVRLTIEVSPL-YSRDGKAFATLLS 407
           R     +LR  + +   S   ++I      R G   V +TI V P+ + R G     L++
Sbjct: 561 RGELRLQLRRAVAQAIASHGRIQISGIRHNRQGV-VVSVTILVIPVRFPRAGNDL-LLVT 618

Query: 408 F------------------FDTSRVYLLQQEIEAAQESLETTIEELQSSNEELETTNEEL 449
           F                   D   V  L+ E+   +E L  TIEEL +++  L   NEE+
Sbjct: 619 FTAGDTAPSMPAGEAAPPPADMDGVEQLESELRMTREELNDTIEELSATSAALRAANEEI 678

Query: 450 QSTNEELETTNEELQSTNEELETMNEELRSTNEELEVANEEMRRQSEEAGEYRLYSESIL 509
            S  EE ++T EEL+++ EEL+++NEEL + N +L    +E+   + + G       ++L
Sbjct: 679 LSIGEEYQSTTEELETSKEELQSLNEELSTLNAQLHEKVDELEATTNDLG-------NLL 731

Query: 510 RSIDVGIIVLDDNLTVQSWNRWSENVWGLRNEEVMGEVFLDLDIGLPVQRLRRP------ 563
            S D+  I L  +L ++ +   +  ++ L          L  D G P+  + R       
Sbjct: 732 SSTDIATIFLSSDLRIKRFTPTATRLFAL----------LPQDTGRPITDIARHFSDPYL 781

Query: 564 LHDILTTQAAVEPVEITV-MDRRGRRIACRIRLSPLLYDTRLAR--GVVLIIEDVTERAR 620
           L DI +  ++V P E  V MD  G     R R+ P  Y T+ AR  GVV+   DVT   R
Sbjct: 782 LADIRSVLSSVTPSEREVSMD--GDTTYLR-RIQP--YRTQHARVEGVVITFSDVTPLKR 836

Query: 621 S 621
           +
Sbjct: 837 T 837