Pairwise Alignments

Query, 630 a.a., Sialic acid TRAP transporter permease protein SiaT from Azospirillum sp. SherDot2

Subject, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  320 bits (821), Expect = 9e-92
 Identities = 203/611 (33%), Positives = 321/611 (52%), Gaps = 30/611 (4%)

Query: 24  RWLGQLDRGIGFLVELPAALLVLAEVGVLLVGVIWRYLLHSPIIWSDELASILFLWLAMF 83
           RWL  L R    + E  A  ++  +V V+ V V++RY LH P  W++E+A  L +    F
Sbjct: 28  RWLAWLMR----MTEYVAGAVLAVDVVVVFVSVVFRYFLHDPFDWAEEVARALMVIQVFF 83

Query: 84  GSVVALRRGEHMRMTALVGMLGPRAQAFLDVLAMTAALAFLLLMAEPAYEFASEEVWVTT 143
           G+   L R +H+ +    GML  R Q  L            +++   A  FAS       
Sbjct: 84  GAATVLARSQHVGVDLFRGMLPARWQPAL------IQFGNWIVVGVSASLFASS----CE 133

Query: 144 PALDIANSWRASALPVGI-VLMISVALLRLARVGRAADV------LWAALAVVATIGAAV 196
             LD  N   +  LP  I V  +++  L +   G A  V      +W+ L +   + AAV
Sbjct: 134 LLLDSYNMTTSIGLPQWIYVYPVAIGSLFMTLFGLANAVNGPSRMVWSTLGIGIALTAAV 193

Query: 197 LAGPVFAGLGNLNLLLFFVVGVGVMVFLGLPIAFSFGLATFGYLSLATSTPAIVMVGRMD 256
           +A         +        G    + LG+PIAF   L++  +     S P +V   ++ 
Sbjct: 194 VAWNTLMSAHAIAPWALLAAGFFGGMALGMPIAFVLALSSLVFFMADPSLPMLVYSQQVM 253

Query: 257 EGMSHLILLSVPLFVFLGQLIEMTGMARAMVGFLASLLGHVRGGLSYVLIGAMYLVSGIS 316
            G  H +LL++P FV  G L+E  GM+  ++  L  + G +RGGL  + I A    SG+S
Sbjct: 254 AGTDHYVLLAIPFFVLAGLLMEANGMSSRLIELLLRMFGRLRGGLGLITITATAFFSGVS 313

Query: 317 GSKAADMAAVAPVLFPEMKARGAKPGDLVALLSATGAQTETIPPSLVLITIGSVTGVSIA 376
           GSK AD+AAV  ++ P ++     P +   LL+ T    ETIPP + +I +G V  +SIA
Sbjct: 314 GSKLADIAAVGGIIMPAVRKTKQDPNETAGLLACTAVMAETIPPCINMIIMGFVANISIA 373

Query: 377 ALFTGGLLPGIVLGVALGGL---VWWRYRDEDLSHVRRASRGEIGKAFLIALPAIALPFI 433
            LF  GL+P +VL V+L  +   V  +   ++   VR      +G A L+AL  +A+   
Sbjct: 374 GLFMAGLVPAVVLAVSLAAVTIYVGTKINPDEAFDVRTPMFRLLGGA-LVALVMVAM--- 429

Query: 434 IRAAVIEGVATATEVSTIGIVYAVIAGLLVYRQFDWRRIYPMLVDTAALSGAILLIIGAA 493
           I   V  GVAT+TEVS+  ++YA++ G L +R+   + +  + V +A+++G IL I+ AA
Sbjct: 430 IGKGVTSGVATSTEVSSFAVIYALVVGWLAFRELTVKSVARLFVRSASMAGGILFIVAAA 489

Query: 494 TGMAWALTQSGFSNTLATAMRELPG--GVPVFIAVSIVAFIILGSVLEGIPAIVLFGPLL 551
           + +++ALT       L+  M       G  +F+ +S++  I+ G++LEG PA+++FGPLL
Sbjct: 490 SSLSFALTIQQIPQYLSEFMIGFAHSYGSTMFVMLSVLIMIVFGAILEGAPALIIFGPLL 549

Query: 552 FPIARQIGVHEVHYAMIVILAMGIGLFAPPFGVGYYAACAISRISPDEGMKPILGYLAAL 611
            PIA Q+GV+ +H+  ++++AMG GLFAPP G+G +A CAI+     +  +P+L YLA L
Sbjct: 550 TPIASQLGVNPLHFGTVMVIAMGFGLFAPPVGLGLFATCAITGTQVKDVARPMLKYLAVL 609

Query: 612 AVGLIVVAAFP 622
            V L+V+   P
Sbjct: 610 FVTLVVLVLVP 620