Pairwise Alignments

Query, 339 a.a., HTH-type transcriptional regulator CdhR from Azospirillum sp. SherDot2

Subject, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  277 bits (709), Expect = 2e-79
 Identities = 142/320 (44%), Positives = 210/320 (65%), Gaps = 11/320 (3%)

Query: 15  TIGFLLVPDFSMIAFTAAVEPLRLANHISGKELYRWVLLSPTGGVQRASNGIGICVDHAI 74
           +I F L+P F+M+ F AAVE LR+AN + G   Y W L S  G    +S+GI + VD  +
Sbjct: 10  SIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCL 69

Query: 75  AD---------CPPLSTVMVCSGIGGHWYEDRAMFSWMRRSAAQGIAFGALCTASHILAR 125
           AD          P ++  ++CSGI    + ++++ +W+R +  +GIA G+LCTA+HILA+
Sbjct: 70  ADERRYVSGENRPEMA--IICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQ 127

Query: 126 AGLLNGYRCTIHWENMAGFAETFPEIEATGELFTIDRNRFTCAGGTAATDMMLHLIAARH 185
           AGLLNG RC IHWEN+ GF+E FP++E   +LF +D N +TCAGGTA+ DMML LI    
Sbjct: 128 AGLLNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMMLSLIGQDF 187

Query: 186 GEKLAMDIAEQLLHTKIRAGSIRQQEELQANPVLDHEDLHAAVAVMQANIEEPLDLLTLA 245
           GE L   + EQ L  ++R+ + RQ+  L+A   + +  + + + +M+ N+ EPL LL +A
Sbjct: 188 GENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEPLSLLDIA 247

Query: 246 AELGQSRRNLERLFRKYMNCSPAKYYLGLRMKRARQLLCQTRMSVMEVSISCGFISATHF 305
                SRR +ERLFR+ M  SPA+YYL +R+ RAR LL Q+ M V+EV+++CGF+SA+HF
Sbjct: 248 DAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHF 307

Query: 306 SKCYRDHFGIAPRSDRQSQR 325
           SKCYR+ +   P+ +R  ++
Sbjct: 308 SKCYREIYNRTPQQERAERK 327