Pairwise Alignments

Query, 398 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

Subject, 350 a.a., HTH-type transcriptional regulator CdhR from Azospirillum sp. SherDot2

 Score =  390 bits (1002), Expect = e-113
 Identities = 197/342 (57%), Positives = 244/342 (71%), Gaps = 11/342 (3%)

Query: 16  GKTVEYRRFGGSGPAPRQEERALLSVGFILTNNFTLTALAPFIDALRLAADEGDRSRQIR 75
           G+ V  R+   +  APR      LSVGF+LT NFTLTAL+ F+D LRLAAD+GD SRQ  
Sbjct: 13  GQFVVRRQCDRTWKAPRPR----LSVGFLLTRNFTLTALSSFMDMLRLAADDGDSSRQRH 68

Query: 76  CRWTIMGSRAEPVMSSCGIGVARWEPLTDPRRFDYVVVVGGLLHAGPQLDDETLAYLRAA 135
           CRWT+MG   EPV SSCG+ +A W+ L D + FDY+VVVGGLL  GPQLD  T AYLR A
Sbjct: 69  CRWTVMGLGREPVRSSCGLDIAPWDDLRDVQEFDYLVVVGGLLDDGPQLDPTTQAYLREA 128

Query: 136 ASYGVTLVGVCTGSFVLSRIGLMKNRRCCVSWYHHRDFIEEFPDLVPVADQLYVVDRDRI 195
               V L+GVCTG F L   GLM+ RRCCVSWYHHRDF  +FP+    AD+L+VV RDRI
Sbjct: 129 VRKDVRLIGVCTGVFALVEAGLMEGRRCCVSWYHHRDFAAKFPNHPFTADELFVVGRDRI 188

Query: 196 TCSGGAGVADLAAFLIERHLGRATAQKTMHILLIDKARPASQSQPQP----PTVVE---I 248
           TC+GG   AD+AA+LIERH+G A A+K +HIL  D+ARP  Q+QPQP    P   +   I
Sbjct: 189 TCAGGTAAADVAAYLIERHIGAAAARKALHILQNDRARPPDQAQPQPQPLGPAAADPSAI 248

Query: 249 TNDRVRRALLLMEQHISDPLSVEEIVHRLNVSTRQFERLFRLAVGTSPATYYRSLRLRYG 308
            ++R+RRA LLMEQ++S PLS++E+  R+ VSTRQF RLFR+  G SP +YYR LRL Y 
Sbjct: 249 ADERIRRATLLMEQNLSVPLSLDELAQRVQVSTRQFIRLFRMHTGASPLSYYRQLRLNYA 308

Query: 309 HWLLRNTKRSVTAIANEAGFADCAHFSRQFRELFGVSPSEVR 350
            W+L ++  S+T IA EAGF+DCAH SRQFR +FG+ PS +R
Sbjct: 309 RWMLTHSDESITQIALEAGFSDCAHLSRQFRTVFGIPPSSLR 350