Pairwise Alignments

Query, 278 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  172 bits (437), Expect = 5e-48
 Identities = 102/277 (36%), Positives = 166/277 (59%), Gaps = 9/277 (3%)

Query: 1   MSDYAKPVSGGRRIDFDALSFRIVMTGIALMALVLLVAPTVVVIWVSFTSGYSLKFPPPG 60
           +S Y  PV    R+ F +L    ++ G+ L+ L+L   P +V+I +SF SG  L +P  G
Sbjct: 2   LSPYMSPVE---RVWFYSLR---ILCGLILLFLIL---PVLVIIPLSFNSGSFLVYPLQG 52

Query: 61  YSLRWYAELWDAWQLQFAMMNSLTVAAWATGLSILLGVSASLGIARSPTLTAKVLDSLFL 120
           +SL WY + + + +   A+ NS+ VA  AT L+++ G  A++G+ R       ++ +L +
Sbjct: 53  FSLHWYQDFFASAEWMRALKNSVIVAPAATVLAMVFGTLAAIGLTRGNFPGKALVMALVI 112

Query: 121 SPLVLPALAFGLSSLMFFSMIGVPVSPLTLIIGHTVVSVPFVVRNTVASLAQMNPSLLEA 180
           SP+V+P +  G++S +FF+ +G+  S  +LI+ H V+ VPFV+    A+L   N +L+ A
Sbjct: 113 SPMVVPVVIIGVASYLFFAPLGLGNSFFSLIVVHAVLGVPFVIITVSATLQGFNHNLVRA 172

Query: 181 SSSLGAGRWYGFRRVTLPLIRPGIMAGGFIAFMASFDNVPVSLFLRDAATDMLPIRMWQD 240
           ++SLGA     FRRVTLPLI PG+++G   AF  SFD V V+LFL       LP +M+  
Sbjct: 173 AASLGASPLTAFRRVTLPLIAPGVISGALFAFSTSFDEVVVTLFLAGPEQATLPRQMFSG 232

Query: 241 LEGRLDVTVAALSGVLIVVTIGLMLVMERVAGLSKRL 277
           +   L  T+AA + +LI  ++ L+L +E + G S++L
Sbjct: 233 IRENLSPTIAAAATLLIAFSVLLLLTLEWLRGRSEKL 269