Pairwise Alignments

Query, 278 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 289 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  143 bits (361), Expect = 4e-39
 Identities = 84/258 (32%), Positives = 138/258 (53%), Gaps = 9/258 (3%)

Query: 24  VMTGIALMALVLLVAPTVVVIWVSFTSGYSLKFPPPGYSLRWYAELW---------DAWQ 74
           V T +A + L L   P + +I +SF++  +L+FPP  YSL+WY   W          A  
Sbjct: 26  VTTLLAAVVLFLAALPILTMIAMSFSASDTLEFPPHAYSLQWYRAAWHTFVSPDANSALS 85

Query: 75  LQFAMMNSLTVAAWATGLSILLGVSASLGIARSPTLTAKVLDSLFLSPLVLPALAFGLSS 134
           +  A+  SL VAA    ++ L+ V A+  ++R        ++ L   PLV P +  GLS 
Sbjct: 86  MGTALATSLIVAASTMIIATLVSVPATYALSRYRFRGKPAVEQLVALPLVYPLVMLGLSL 145

Query: 135 LMFFSMIGVPVSPLTLIIGHTVVSVPFVVRNTVASLAQMNPSLLEASSSLGAGRWYGFRR 194
           L+ F+++ V +    LII H ++++PF V+N  AS+A + P   EA+  +GA        
Sbjct: 146 LLVFNVLPVELGMFRLIIAHVILALPFTVKNCAASVASIGPEFEEAACVMGASPQRAMID 205

Query: 195 VTLPLIRPGIMAGGFIAFMASFDNVPVSLFLRDAATDMLPIRMWQDLEGRLDVTVAALSG 254
           V LPL+RPGI+AG   AF+ SF+   V+ FL +  T  LP+ ++      LD TV + + 
Sbjct: 206 VVLPLMRPGILAGMLFAFIISFNEFTVTFFLYNIDTMTLPVWLYSRTVSSLDPTVFSFAV 265

Query: 255 VLIVVTIGLMLVMERVAG 272
            ++ +   L+ ++E++ G
Sbjct: 266 FIVAIDFALIWLLEKLIG 283



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 229 ATDMLPIRMWQDLEGRLDVTVAALSGVLIVVTIGLMLVM 267
           +  MLP+R+   L GRL      L+ V++ +    +L M
Sbjct: 7   SVSMLPMRLPSTLPGRLGKVTTLLAAVVLFLAALPILTM 45