Pairwise Alignments
Query, 685 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 1289 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas sp. S08-1
Score = 518 bits (1333), Expect = e-151
Identities = 289/675 (42%), Positives = 401/675 (59%), Gaps = 3/675 (0%)
Query: 5 TEEQYRSIFENAVEGIYQTTVDGRYLRVNPALADIYGYASPEDLIANLTDIACQLYVDPG 64
+E ++R+ FE A GI DGR+LRVN L + Y E L DI +D
Sbjct: 609 SELRFRATFEQAAVGIAHLAPDGRWLRVNQRLCQMLDYDREELLALTFQDITHPDDLDKD 668
Query: 65 KREAFADLMARQDRVLSFEARVFRRDGSIIWISESARCVRDAAGRIRYYEGTVQDITERK 124
L+A + L+ E R RRDG ++W + SA VR G Y+ V+DI RK
Sbjct: 669 MGLT-GQLLAGEIPRLTLEKRYLRRDGKVLWANLSATLVRHTNGEPHYFISVVEDIGVRK 727
Query: 125 QHEEKIRLLATVFDSVADGILIVDPELTVQAINPAYEIMTGFQREELLRKPLVLFAPGSH 184
Q E + ATVF+S + ++IVD + NPA+ +TG ++ L + L L S
Sbjct: 728 QQERALHQAATVFESTQEAVVIVDARRRILTSNPAFTAITGLSPQQALGQRLPLLPDNSL 787
Query: 185 EREFVDAIWTTARQAGRWQGEVTSFRHSGDAFAAALSVTSVRAPNGVLEHYVLTIADISQ 244
ER +W + +G WQGE+ S R G F L+V+ VR + YVLT D+SQ
Sbjct: 788 ERARYRTLWRKVQDSGHWQGEMNSRRQDGSRFPFWLTVSRVRDCDPQQPQYVLTFTDLSQ 847
Query: 245 RKSQEHQIRYQASFDRLTDLPNRWLVCERLEEAIVRAQRTKSKVAVAFLDLNRFKQVNDT 304
+ + ++ + A FD LTDLPNR ERL A+ AQR + +VAV + DL+ FK +N++
Sbjct: 848 YRDSQERLAHLAHFDTLTDLPNRLYAMERLGHALEHAQRHQERVAVLYFDLDNFKTINES 907
Query: 305 LGHHAGDELLKLVARRLRNCTRMTDTVGRLGGDEFLIVAPDAADRSAGARLVEKVLYSMS 364
LGH GDELL VARRL+ R DT+ RL DEFL+V + A + ++ +
Sbjct: 908 LGHKVGDELLVAVARRLQQRLRNEDTLARLSSDEFLVVLENLQRPEEAAGIARTLIELLE 967
Query: 365 EPFSVHN-QELFCGASIGIAFYPDDGETADQLLRNADLAMYHAKRNPEHKYVFYDSGMRE 423
P + N +E + GASIGI+ YPDDG+ +D LLRNAD A++ AK+ + + FY G+
Sbjct: 968 RPLPLGNGREAYLGASIGISLYPDDGQNSDDLLRNADSALHQAKQEGRNTFRFYTQGLTH 1027
Query: 424 RSGFTLGLESDLRRASGGDEFELHFQPKIDLVGNRTIGAEALIRWRHPVRGVVSPAEFIP 483
++ L LE LR+A +EF LH+QP + IG EAL+RW G++SPA+FIP
Sbjct: 1028 QAHTRLTLEGQLRQALKRNEFILHYQPLVRGHDGHPIGVEALLRWNSSA-GMISPAQFIP 1086
Query: 484 LAEETGLIWEIGAWTLIESCRRLADWIRRDLPIPSVSVNLSPRQFQDARLVGFVRSVVES 543
LAEETGLI IG W L E+CR++ W ++ L + +++VNLSPRQF+ A L VR +
Sbjct: 1087 LAEETGLIVPIGNWVLREACRQMQFWRQQGLDLHTLAVNLSPRQFRQADLQQQVREALHD 1146
Query: 544 AGIPADRLELELTEGAMIGDIEKAVTILNGLKDIGVRLSIDDFGTGYSSLAYLKRFPIDT 603
+G+PA+ LELE+TEGA+I ++E+A L LK++G++L+IDDFGTGYSSLAYL+RFP+D
Sbjct: 1147 SGLPAEHLELEITEGALIENVEQAQATLAALKELGLKLAIDDFGTGYSSLAYLRRFPLDK 1206
Query: 604 LKIDRSFVRDIVKSTTDPAIVGTIVNLAESLGFDTIAEGVETQEQADMLRQQRCTRIQGY 663
LKID+SF+R + + + IV TIV LA +L +AEGVET EQ LRQ C + QGY
Sbjct: 1207 LKIDQSFMRGVPEDQANLEIVATIVGLARNLKLCVLAEGVETTEQLHALRQLGCEQCQGY 1266
Query: 664 LISRPLPIDQFEAFL 678
L SRPL Q +L
Sbjct: 1267 LFSRPLSAVQLAHWL 1281
Score = 48.5 bits (114), Expect = 2e-09
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 4 DTEEQYRSIFEN----AVEGIYQTTVDGRYLRVNPALADIYGYASPEDLIANLTDIACQL 59
++E+++R +FE AV+G + + R + N A +YGY + + L + L
Sbjct: 192 ESEQRFRQLFEQTPRIAVQGYDR---ERRVIFWNQASTQLYGYDVADAMGRRLEE----L 244
Query: 60 YVDPGKR-EAFADL---MARQDRVLSFEARVFRRDGSIIWISESARCVRDAAGRIRYYEG 115
+ P R + +D+ M + + E + RDGS + + S +R+ ++ Y
Sbjct: 245 IIPPAMRSQVVSDIQNWMIGGPAIPAAELTLQHRDGSEVHVYSSHLILRNTRNQVELYCV 304
Query: 116 TVQDITERKQHEEKIRLLAT---VFDSVADGILIVDPELTVQAINPAYEIMTGFQREELL 172
+ ++ H+E A + + + + I + D + +NPA++ +TG+ E +
Sbjct: 305 DIDLGQQKSAHQELEASEARYRELVEQLHEAIFLTDSAGRLTFVNPAWQTITGYSIRESV 364
Query: 173 RKPLVLFAPGSHEREFVDAIWTT-ARQAGRWQGEV 206
+PL+ F I A Q W GEV
Sbjct: 365 GRPLLDFIEDDQRESATQHIAAVIAHQQSSWLGEV 399
Score = 35.0 bits (79), Expect = 2e-05
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 5 TEEQYRSIFENAVEGIYQTTVDGRYLRVNPALADIYGYASPEDLIANLTDIACQLYVDPG 64
+E +YR + E E I+ T GR VNPA I GY+ E + L D +++
Sbjct: 321 SEARYRELVEQLHEAIFLTDSAGRLTFVNPAWQTITGYSIRESVGRPLLD-----FIEDD 375
Query: 65 KREA----FADLMARQDRVLSFEARVFRRDGSIIWISESARCVRDAAGRIR--YYEGTVQ 118
+RE+ A ++A Q E R+ + W+S +R A G G++
Sbjct: 376 QRESATQHIAAVIAHQQSSWLGEVRLRDVNSRPHWVS-----LRLAVGPQHGLGLRGSLS 430
Query: 119 DITERK 124
D+ ER+
Sbjct: 431 DVHERR 436