Pairwise Alignments

Query, 893 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 683 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  177 bits (448), Expect = 3e-48
 Identities = 203/683 (29%), Positives = 272/683 (39%), Gaps = 84/683 (12%)

Query: 249 ALVPAQAAAVRSLGSAETGPAQEPVWLARLARLEPLADDVVLALAGRLYGRRRIAAAERA 308
           AL+ A  AA+ +LG A  G  +E V  + L                 L  + R+A AE  
Sbjct: 31  ALLSALFAALDTLGQA--GTPEEAVARSNLGET--------------LRRQGRLAEAEAH 74

Query: 309 YRHALALRPESGLALSGLGLARATLGM-AGAVPAVLRAVRVAPDDAALAANAGSAFQLAL 367
           +R AL   P+ G      G+    LG  A A  A   A R+ P  A    N G   +   
Sbjct: 75  HRKALDWLPDFGGNHYNWGVTLQALGRPAEAAAAYGEAARLMPGFAPAPCNQGVLLRELG 134

Query: 368 QPEAALSWHRRALVLTPDAVAAWVNIGTLLLEANAAEEAIPPLDRAGRLGDITRDMDQLA 427
           + + A +  RRAL L    V A + +  L  +    + A         L      M  LA
Sbjct: 135 RLDEAEAALRRALELDHALVPARLALAALHRDRGDLDRAAAGFRACLSL------MPDLA 188

Query: 428 LANSNLGVARMALGLHG---EAVAAFRAALDRT-----PDDASIRSNMLFCLCFDDR--- 476
              +NL +A    G  G   E  AA     DR      PD   + + ++       R   
Sbjct: 189 EGQANLALALKERGQRGGPAEDAAASIVGFDRALRIGLPDAGGVLAQLVQQRRHLCRWAG 248

Query: 477 -----ADPVEVFREHRAFERHLPAV------PAAPHAVESR-----------------DP 508
                A  V++ RE R  + +   V      PA   A   R                 D 
Sbjct: 249 LGALSARLVDLVREGRTQQAYPWIVLGEGAGPALERACAERYSGWKTRGIRPGFPKRTDR 308

Query: 509 ERRLRVGYLSPDFQRYPGPGYHFLLPLIEGHNRGRVEVT-CYHSDRSRDATTDRFQAAAD 567
             +LR+GYLS DF  +       +  LIE H+R R E+  C +          R  A  D
Sbjct: 309 GAKLRIGYLSTDFHEHATAV--LIAELIERHDRDRFEIIGCSYGPDDGGPLRKRLVAGFD 366

Query: 568 RWRDVAVLTDEELDRRIREDRIDILVDAGGHMSRNRMPLMARRPAPVQVSLPLYPNTTGL 627
           R  D++ LTDE   R I E  +DILVD  GH    R  + A RPAPVQ     YP T G 
Sbjct: 367 RLLDLSALTDEAAARLIHEAGVDILVDLKGHTQNARPGIAAYRPAPVQAQWLGYPGTLGS 426

Query: 628 GAVDYQIADPRVAPPGADALHAEKLIRLPGCVLCYRPADSAFAPPILP-------PVEGR 680
            A+DY IAD  VAP      + E+++ LP     Y+P D   +    P       P EG 
Sbjct: 427 TAIDYVIADAVVAPADHQRFYCERIVHLPD---SYQPNDRQRSIGPTPGRADCGLPAEG- 482

Query: 681 GHITFGSFNNITKVNAATIALWARLLALVPTAKLVLKWRGLGSGGGADRRLLAAFAGHGI 740
               F +FN   K+       W R+L  VP + L L    L         L  A A  G+
Sbjct: 483 --FVFCAFNAPYKIGPDLFGRWCRILQRVPGSVLWL----LDGPAEVAANLRGAAAERGV 536

Query: 741 GLGRLELRGITPDP--YQDYVTIDVALDPVFANGGTTICDALWMGVPVLNRTGPTKIGHW 798
              RL      P P     +   D+ LD       TT  DALW G+PVL+  G +  G  
Sbjct: 537 APERLIFAPRLPGPAHLARHRLADLFLDSAPVGAHTTASDALWAGLPVLSVPGRSFAGRV 596

Query: 799 GATLLDAVGMAELVTRDDEAYLAQGVRLATDRAFLDAQREDLRERMRRSALMDEPGYARA 858
            A+LL AVG+ +L   D +AY A   RLA   A L A +  L +    + L D   +AR+
Sbjct: 597 AASLLRAVGLPKLAVADWDAYEATAQRLAEQPAELAALKLRLEQACATAPLFDTDRFARS 656

Query: 859 VEAGYRTAWRRWCAGLPAVAFDV 881
           +E+ + T W    AG P   F V
Sbjct: 657 IESAFATMWDIHAAGEPPRGFAV 679



 Score = 47.4 bits (111), Expect = 3e-09
 Identities = 50/169 (29%), Positives = 64/169 (37%), Gaps = 19/169 (11%)

Query: 310 RHALALRPESGLALSGLGLARATLGMAGAVPAVLRAVRVAPDDAALAANAGSAFQLALQP 369
           R  LA +      LS L  A  TLG AG            P++A   +N G   +   + 
Sbjct: 20  RRRLAGKAGDAALLSALFAALDTLGQAGT-----------PEEAVARSNLGETLRRQGRL 68

Query: 370 EAALSWHRRALVLTPDAVAAWVNIGTLLLEANAAEEAIPPLDRAGRLGDITRDMDQLALA 429
             A + HR+AL   PD      N G  L           P + A   G+  R M   A A
Sbjct: 69  AEAEAHHRKALDWLPDFGGNHYNWGVTLQALGR------PAEAAAAYGEAARLMPGFAPA 122

Query: 430 NSNLGVARMALGLHGEAVAAFRAALDRTPDDASIRSNMLFCLCFDDRAD 478
             N GV    LG   EA AA R AL+   D A + + +       DR D
Sbjct: 123 PCNQGVLLRELGRLDEAEAALRRALEL--DHALVPARLALAALHRDRGD 169



 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 79/301 (26%), Positives = 109/301 (36%), Gaps = 54/301 (17%)

Query: 10  RPAGTADAQALLTRAVTHHQTGQLAEAATLYEQVLKRLPKQADALHLSGLIKAQTGAVPE 69
           R AG A   ALL+       T  L +A T         P++A A    G    + G + E
Sbjct: 22  RLAGKAGDAALLSALFAALDT--LGQAGT---------PEEAVARSNLGETLRRQGRLAE 70

Query: 70  GIERIRQAVKADPRQPLFHANLGRLLEAAEQWEDAATAFRSAGRLAPLDPSLPRMEAAAW 129
                R+A+   P     H N G  L+A  +  +AA A+  A RL P     P  +    
Sbjct: 71  AEAHHRKALDWLPDFGGNHYNWGVTLQALGRPAEAAAAYGEAARLMPGFAPAPCNQGVLL 130

Query: 130 TKLGRQDAAAPPLLRAMALEPADAGSAADLGDALYDCGRFLPAADWYGRAAALEPHRVLA 189
            +LGR D A   L RA+ L+ A                              L P R+  
Sbjct: 131 RELGRLDEAEAALRRALELDHA------------------------------LVPARLAL 160

Query: 190 AFNRGAALRDGGRIAEAAAAFRALAGRAPEMVEPLEHSMQLSQQLGQHLG-AGTAARRLL 248
           A    A  RD G +  AAA FRA     P++ E   +     ++ GQ  G A  AA  ++
Sbjct: 161 A----ALHRDRGDLDRAAAGFRACLSLMPDLAEGQANLALALKERGQRGGPAEDAAASIV 216

Query: 249 ALVPAQAAAVRSLGSAETGPAQEPVWLARLARLEPLADDVVLALAGRLYGRRRIAAAERA 308
               A    +   G       Q+   L R A L         AL+ RL    R    ++A
Sbjct: 217 GFDRALRIGLPDAGGVLAQLVQQRRHLCRWAGLG--------ALSARLVDLVREGRTQQA 268

Query: 309 Y 309
           Y
Sbjct: 269 Y 269