Pairwise Alignments
Query, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 647 a.a., Sensor histidine kinase RcsC from Pseudomonas sp. DMC3
Score = 300 bits (768), Expect = 3e-85
Identities = 228/668 (34%), Positives = 332/668 (49%), Gaps = 53/668 (7%)
Query: 633 RNATILLADDNADMRSYVERLLTAAGYRVETVGDGVAAVETAKAAPPDLVLSDVMMPHLD 692
R+ +L+ DDN R + R L GY V G G + ++ D ++ DV +P +
Sbjct: 3 RDIRLLIVDDNVATRYALRRRLERHGYTVLEAGTGSDGLALIESEALDALILDVNLPDMS 62
Query: 693 GFGVIAALRGHPHTRDLPIILLSARAGEESSI-EGLQAGADDYLVKPFSARELLARVEGA 751
GF ++ LR P T LP+I +SA + + I GL AGAD YL+ P LLA +
Sbjct: 63 GFDIVRLLRADPRTALLPVIHVSAASIQTGDIITGLNAGADAYLIHPVDPDVLLATLRTL 122
Query: 752 LRLAELRRETAEQLRQANEALERRVEERTRERDRFWRLSRDPFLVADREGRWLSASPAWT 811
LR+ R+T LR E R R+ F +S P V D + + A+
Sbjct: 123 LRV----RDTENALR----------ESEARFREIFANVSA-PIAVLDANLKVHECNHAFA 167
Query: 812 EILGWTEAEMLGRTSEWMEHPDDCDKTRREVRKLAGGGSTFRFENRFRTRGGHYRDFAWT 871
+++ + R +D E+R G ++ R +G R+ W
Sbjct: 168 QLIVDNRDQQALREC----FAEDQCSILDELRLRLVDGERWKGTLNMRVQG-EIRETQWQ 222
Query: 872 ATP--ADELMFCVARDVTEEKERA----ATLRKT--------------EEQLRQSQKMEA 911
+P EL DVTE + R A L T E QL Q QKM+A
Sbjct: 223 ISPYRTPELSLVFVEDVTEHRHRERSHLARLDDTTTQLAKEVAERVHAEAQLLQVQKMDA 282
Query: 912 VGQLTGGMAHDFNNLLQAMSSCLQLVSRRVG--HAPEVEPILDAGRQAVDRGASLIRQLM 969
+G+LTGG+AHDFNNLL + + L+L+ +RV +V+ +A + ASL +L+
Sbjct: 283 LGKLTGGIAHDFNNLLTGIITSLELIQKRVADERLDKVQFYTEAALNSAMSAASLTHRLL 342
Query: 970 AFSRRQSLQPEAFDVRDRLLGLRLFLDRALRADIGLEFALQGGLWPVMADPVQFDLAVLN 1029
AF+R+Q L D+ + + L L R + I L+ L + DPVQ + AVLN
Sbjct: 343 AFARQQPLDTRPVDINEHVRSLEELLVRTIGERITLKLELTNKPAIALVDPVQLESAVLN 402
Query: 1030 LATNARDAIDADGAVVVGADNVVLDGMDGLS-GEFLKVFVRDSGRGIAPDALGRVFEPFF 1088
L NARDA+ + G + V G L+ G ++ + VRD G GI + + +VFEPFF
Sbjct: 403 LVINARDALPSGGNIWVNTYAAYSHGDPNLADGAYVALSVRDDGTGIEHNVIDKVFEPFF 462
Query: 1089 TTKAVGKGTGLGLAQVYGFCRQSGGTATVESVEGKGTVVSLLLPRAEATVASETPNAPPV 1148
TTK +G+GTGLGL+ +YGF RQSGG A + SV +GT V+++LP ++ P P
Sbjct: 463 TTKPLGQGTGLGLSTIYGFARQSGGDAHIRSVARRGTEVTIMLPGTNDPTGADAPVPVPD 522
Query: 1149 LPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEEALRRLE-EAAVDLLFSDVV 1207
+ + HVL+VED V VT LED GYR T+AA E AL RL+ + ++DLL +DV
Sbjct: 523 AKGSGE-HVLIVEDMATVRLFVTEVLEDAGYRCTQAADIESALERLQNDPSIDLLLTDVG 581
Query: 1208 MPGSINGVALAQEARQRWPDLGILLTTGYSE-----DLAATKSVRVLSKPYRIEDLAHAI 1262
+P ++G LA AR L IL TGY+E + + +L KP++I +L +
Sbjct: 582 LP-RMSGRELADVARGWHEGLPILFMTGYAETALNRQVFLGTGMDMLVKPFQISELLDKV 640
Query: 1263 QEELEDGA 1270
+ L DGA
Sbjct: 641 RRTL-DGA 647
Score = 76.6 bits (187), Expect = 6e-18
Identities = 108/419 (25%), Positives = 164/419 (39%), Gaps = 87/419 (20%)
Query: 356 SHEFRTPLTLMLGPVEDMLQRSPAEDR---------AAVPVERDALELVHRNGQRLLRLV 406
+H+F LT ++ +E ++Q+ A++R AA+ A L HR
Sbjct: 291 AHDFNNLLTGIITSLE-LIQKRVADERLDKVQFYTEAALNSAMSAASLTHR--------- 340
Query: 407 NALLDVSRIEAGRMKARFEPVDLAAFTAELASSF-RSAMDRAGLDYRIDCPPLPEPVWID 465
LL +R + PVD+ L R+ +R L +++ P +D
Sbjct: 341 --LLAFAR----QQPLDTRPVDINEHVRSLEELLVRTIGERITL--KLELTNKPAIALVD 392
Query: 466 RDLWEKIVLNLISNAFKYTLSGG-VAVAVQPV----------GERAVLTVRDTGVGIPAE 514
E VLNL+ NA SGG + V G L+VRD G GI
Sbjct: 393 PVQLESAVLNLVINARDALPSGGNIWVNTYAAYSHGDPNLADGAYVALSVRDDGTGIEHN 452
Query: 515 EQPRVFDRFHRIEGQSGRTHEGTGIGLALVKDLTQLHGGTVALDSDVGRGSTFTVTLPFG 574
+VF+ F + +GTG+GL+ + + GG + S RG+ T+ L
Sbjct: 453 VIDKVFEPFFTTKPLG----QGTGLGLSTIYGFARQSGGDAHIRSVARRGTEVTIML--- 505
Query: 575 NAHVPATERPAGPIPASTATRADAFVAEALHWLPQEQGEQSAPALVDGASSGPAPERMRN 634
P T P G ADA V +P +G
Sbjct: 506 ----PGTNDPTG---------ADAPVP-----VPDAKGS--------------------G 527
Query: 635 ATILLADDNADMRSYVERLLTAAGYRVETVGDGVAAVETAKAAPP-DLVLSDVMMPHLDG 693
+L+ +D A +R +V +L AGYR D +A+E + P DL+L+DV +P + G
Sbjct: 528 EHVLIVEDMATVRLFVTEVLEDAGYRCTQAADIESALERLQNDPSIDLLLTDVGLPRMSG 587
Query: 694 FGVIAALRGHPHTRDLPIILLSARAGEESSIEGLQAGADDYLVKPFSARELLARVEGAL 752
+ RG LPI+ ++ A + + D LVKPF ELL +V L
Sbjct: 588 RELADVARG--WHEGLPILFMTGYAETALNRQVFLGTGMDMLVKPFQISELLDKVRRTL 644