Pairwise Alignments

Query, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 838 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  498 bits (1281), Expect = e-144
 Identities = 294/560 (52%), Positives = 357/560 (63%), Gaps = 42/560 (7%)

Query: 747  RVEGALRLAE---LRRETAEQLRQANEALERRVEERTRERDRFWRLSRDPFLVADREGRW 803
            +V GA+ + E    R+   E  R   E ++  +         FW L  D F V +     
Sbjct: 285  QVSGAIAMLEDIDHRKRALETARTDAERVQLALSAGAIIGTWFWDLPTDRFTVDEAFAAT 344

Query: 804  LSASPAWTEILGWTEAEMLGRTSEWMEHPDDCDKTRREVRKLAGGGSTFRFENRFRTRGG 863
                PA    LG  +   L +  E + HPDD       + +    G  +  + R R   G
Sbjct: 345  FGLDPA----LG-RDGISLAQVVETV-HPDDRAGLAEAMGEAIARGGRYAHQYRVRRHDG 398

Query: 864  HY-----------------RDFAWTATPADELMFCVAR------------DVTEEK--ER 892
             Y                 R F       +E    VA             D  E++  ER
Sbjct: 399  RYYWIEANGRVDLDADGTPRGFPGVLIDVEERRTIVAERDRAIAELRSLNDTLEQRVAER 458

Query: 893  AATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQLVSRRVGHAPEVEPILD 952
             A L + EE+LRQ+QKMEAVGQLTGGMAHDFNNLLQAMS CLQLV RR GH   V+ +L+
Sbjct: 459  TAELMQAEEKLRQAQKMEAVGQLTGGMAHDFNNLLQAMSGCLQLVGRRAGHVAGVQKVLE 518

Query: 953  AGRQAVDRGASLIRQLMAFSRRQSLQPEAFDVRDRLLGLRLFLDRALRADIGLEFALQGG 1012
            +G QAVDRGAS+IRQLMAFSRRQSL+PEAFD+RDRLLG+R FLDRALRADI LEF L+GG
Sbjct: 519  SGHQAVDRGASMIRQLMAFSRRQSLEPEAFDIRDRLLGMRSFLDRALRADIRLEFDLEGG 578

Query: 1013 LWPVMADPVQFDLAVLNLATNARDAIDADGAVVVGADNVVLDGMDGLSGEFLKVFVRDSG 1072
            LWP MADPVQF+LA+LNLATNARDAI   G +++GA NV   G  GL G F++++VRDSG
Sbjct: 579  LWPAMADPVQFELAILNLATNARDAIAGAGRLMIGAGNVEQCGEHGLHGSFVRIWVRDSG 638

Query: 1073 RGIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQSGGTATVESVEGKGTVVSLLLP 1132
             G+AP  L R+FEPFFTTK VG+GTGLGLAQVYGFCRQSGG ATV+SVEG+GT V+LLLP
Sbjct: 639  HGMAPAMLERIFEPFFTTKPVGQGTGLGLAQVYGFCRQSGGIATVDSVEGQGTKVTLLLP 698

Query: 1133 RAEATVASETPNAPPVLPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEEALR 1192
            RAE T+     +    +       VLLVEDDPVVA V+ AALE++GY+V+RA TGEEALR
Sbjct: 699  RAE-TMPVAAVDVQRAMVDGGGASVLLVEDDPVVALVIVAALEEIGYQVSRATTGEEALR 757

Query: 1193 RLEEA-AVDLLFSDVVMPGSINGVALAQEARQRWPDLGILLTTGYSEDLAATKSVRVLSK 1251
             L +    DLLF+DVVMPG I+G ALA  AR   P L ++LTTGYSED AA K   VLSK
Sbjct: 758  LLRDGERPDLLFTDVVMPGEIDGAALAAAARVLLPRLAVVLTTGYSEDRAALKGFPVLSK 817

Query: 1252 PYRIEDLAHAIQEELEDGAR 1271
            PYRIEDLA  +++E++  AR
Sbjct: 818  PYRIEDLALTLRQEIDRSAR 837



 Score =  129 bits (324), Expect = 1e-33
 Identities = 71/163 (43%), Positives = 97/163 (59%), Gaps = 6/163 (3%)

Query: 20  MRAKDWAATPFGPVETWSPALRSAIGICLGSRFPIVLYWGPTRALIYNDAWSPVPGNKHP 79
           + A DW+ATP GP E WSPAL +   + L S F +   WGP + L+YN A+ P  G +HP
Sbjct: 8   LEACDWSATPLGPREGWSPALDAIFTMMLASPFAMCATWGPEQTLLYNAAYVPFLGKRHP 67

Query: 80  WALGRPGREVWAEIWDIIGPMFDHVMTAGEATWSEDQLLPLNRFGYVEECYFYYSYSPVR 139
            ALG+P   VW+E+WD IGP+   V+  GEA    D  L + R G  E+ ++ ++YSP+R
Sbjct: 68  AALGQPIAAVWSEVWDTIGPLIARVL-EGEAVSFTDMHLVMTRNGCEEDTWWTFAYSPLR 126

Query: 140 GEDGRVEGIFTAVTETTQRVLAERRERLLRGVSEATSRARSAA 182
            + GRV G+    TETT  V+A R+    R   EA  RAR+ A
Sbjct: 127 -DGGRVVGMLDIATETTAGVIAARQ----RDAVEAELRARNVA 164



 Score = 65.9 bits (159), Expect = 1e-14
 Identities = 104/459 (22%), Positives = 177/459 (38%), Gaps = 78/459 (16%)

Query: 298 TGISPRRRIDAPYVTLFERAAGHIATAITNAEAYEEERRRAEMLAELDRAKTAFFSNASH 357
           T ++ R R  A   +L +     +A         EE+ R+A+ +  + +         +H
Sbjct: 432 TIVAERDRAIAELRSLNDTLEQRVAERTAELMQAEEKLRQAQKMEAVGQLT----GGMAH 487

Query: 358 EFRTPLTLMLGPVEDMLQRSPAEDRAAVPVERDALELVHRNGQRLLRLVNALLDVSRIEA 417
           +F   L  M G ++ + +R+       V   +  LE  H+   R   ++  L+  SR   
Sbjct: 488 DFNNLLQAMSGCLQLVGRRA-----GHVAGVQKVLESGHQAVDRGASMIRQLMAFSR--- 539

Query: 418 GRMKARFEPVDLAAFTAELASSFRSAMDRAGLDYRIDCPPLPEPVWIDRDLWEKIVLNLI 477
            R     E  D+      + S    A+ RA +    D      P   D   +E  +LNL 
Sbjct: 540 -RQSLEPEAFDIRDRLLGMRSFLDRAL-RADIRLEFDLEGGLWPAMADPVQFELAILNLA 597

Query: 478 SNAFKYTLSGGVAVA----VQPVGERAV------LTVRDTGVGIPAEEQPRVFDRFHRIE 527
           +NA       G  +     V+  GE  +      + VRD+G G+      R+F+ F   +
Sbjct: 598 TNARDAIAGAGRLMIGAGNVEQCGEHGLHGSFVRIWVRDSGHGMAPAMLERIFEPFFTTK 657

Query: 528 GQSGRTHEGTGIGLALVKDLTQLHGGTVALDSDVGRGSTFTVTLPFGNAHVPATERPAGP 587
                  +GTG+GLA V    +  GG   +DS  G+G+  T+ LP              P
Sbjct: 658 PVG----QGTGLGLAQVYGFCRQSGGIATVDSVEGQGTKVTLLLP---------RAETMP 704

Query: 588 IPASTATRADAFVAEALHWLPQEQGEQSAPALVDGASSGPAPERMRNATILLADDNADMR 647
           + A    R                      A+VDG            A++LL +D+  + 
Sbjct: 705 VAAVDVQR----------------------AMVDGG----------GASVLLVEDDPVVA 732

Query: 648 SYVERLLTAAGYRVETVGDGVAAVETAK-AAPPDLVLSDVMMP-HLDGFGVIAALRGHPH 705
             +   L   GY+V     G  A+   +    PDL+ +DV+MP  +DG  + AA R    
Sbjct: 733 LVIVAALEEIGYQVSRATTGEEALRLLRDGERPDLLFTDVVMPGEIDGAALAAAAR--VL 790

Query: 706 TRDLPIILLSARAGEESSIEGLQAGADDYLVKPFSAREL 744
              L ++L +  + + ++++G        L KP+   +L
Sbjct: 791 LPRLAVVLTTGYSEDRAALKGFPV-----LSKPYRIEDL 824