Pairwise Alignments

Query, 277 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 6e-43
 Identities = 84/249 (33%), Positives = 140/249 (56%), Gaps = 1/249 (0%)

Query: 1   MLSAHDVTRSFGGLTAVNHVSLEIGPREIVGLVGPNGSGKTTLLNLLSGFLAPTSGEIRF 60
           +L    ++  FGGL AVN V+L +  +++V L+GPNG+GKTT+ N L+GF  P+ G I  
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 61  DGTAVRARRAWQPSRLGLRRTFQLPKLPARMSVLEVMLAGGRLPAGASPWRSLLTPGAVR 120
           DG  ++     Q +R G+ RTFQ  +L   M+ LE +L         + +  L    + R
Sbjct: 65  DGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFKTPSFR 124

Query: 121 REEAAFIGKAMGLLAEVDLAGLADHPAGGLSGGQQKLLGLAAALMDDPAVLLLDEPTAGV 180
           R E   + +A   L +V+L   A+  AG L+ GQQ+ L +A  +M  P +++LDEP AG+
Sbjct: 125 RSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEPAAGL 184

Query: 181 NPSLRRRMADHLRRIREG-GTALVIVEHDMGFIGDLCDRCLALDKGAVIANCRPDELSGN 239
           NP     +   +  +RE     ++++EHDM  +  + D  + +++G  +A+  P+++  N
Sbjct: 185 NPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQIRDN 244

Query: 240 QQVVEAYLG 248
             V++AYLG
Sbjct: 245 PDVIKAYLG 253