Pairwise Alignments

Query, 299 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Azospirillum sp. SherDot2

Subject, 304 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  111 bits (278), Expect = 2e-29
 Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 2   IQILIDTLIRTSDLALIALGLNLSYGVSRFPNVAHVEMAPLGAAVALA--VAALFPGGGL 59
           +Q LI+ L   +   L+ALG  + YGV    N AH  +  +GA ++L   + A    G  
Sbjct: 5   LQQLINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVLGTS 64

Query: 60  VGAAVAGALAAGLAAMLL-----HRFAFERLAGAGPASALIGSLAIAMMLRAGLQAVFGT 114
           V  A+   L A +A   L      R A+  L  A   + LI ++ +++ML+  +    G 
Sbjct: 65  VPLALVLTLVAAMALTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQGA 124

Query: 115 RPQQFDTPLTPPHDLWGAILSD----------LQIAAIAITAVCLIGFFAMLRLTPLGRS 164
           R +    PL PP    G  L D          +Q+  +A+T   +  F  ++  T LGR+
Sbjct: 125 RAK----PL-PPVFRGGITLMDSGDFVVSLSWMQMVIMALTLALMAVFTWVITRTALGRA 179

Query: 165 IRAIAANPALATASGIDARRVTLITVFLGGTLAGIGGILLAL-VTQLDIGMGQMLLLPVF 223
            RA   +  +A+  GID  RV   T  +G  LAG+ G+++ L    +D  +G +  +  F
Sbjct: 180 QRACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFYIGFLAGIKAF 239

Query: 224 AAAIVGGLGSLPGAVIGAFAIALAETLVMRIDFGLLAADGPRYLPLGYLTGIGFALIVVT 283
            AA++GG+GSLPGA++G   I            GL+ A    Y  + Y     F+++V  
Sbjct: 240 TAAVLGGIGSLPGAMLGGLLI------------GLIEAFWSAYFSIEYKDVATFSILVAV 287

Query: 284 LVYRPEGLLSR 294
           LV+RP GLL R
Sbjct: 288 LVFRPTGLLGR 298