Pairwise Alignments

Query, 273 a.a., HTH-type transcriptional regulator NimR from Azospirillum sp. SherDot2

Subject, 314 a.a., HTH-type transcriptional regulator NimR from Pseudomonas lactucae CFBP13502

 Score =  229 bits (583), Expect = 7e-65
 Identities = 117/259 (45%), Positives = 161/259 (62%), Gaps = 1/259 (0%)

Query: 16  DPDLADRPAVARLLDFADYEAEVPVHVHRRGQLILALHGAVTCTADDEIWIVPPDCGVWI 75
           D D+  R  VA          E   H HR+GQL+  L G + C  +  IWIVPP C +WI
Sbjct: 48  DADVVPRAVVAVGASSTSDAWEHAQHTHRKGQLMYTLRGVIHCEIEAGIWIVPPQCALWI 107

Query: 76  PGGMPHSVRTTANARLSYLFVEPGAAN-LPEVCCTLSISPLVRELVNRLTGEVLDYPPDS 134
           PGG PHS R +  A++  L +EP AA  L   CCTL++S L+ EL+++       Y    
Sbjct: 108 PGGTPHSARGSGAAQVYCLLIEPDAARALAPRCCTLAVSGLLHELISKAVSFPQLYDEAG 167

Query: 135 HAARLARVTLDELAGMPREHFNLPISNDPKIRAIADALTLEPSDRSTLGDWARRVAMSER 194
              RL    LDELA  P E  +LP+  D ++R +A++L  +P+D++TLG WA R+ MSER
Sbjct: 168 PQGRLINTLLDELAAAPVEALHLPMPQDARLRRLANSLLADPADKATLGQWAVRIGMSER 227

Query: 195 SLARLMLRETGLTFGRWRQQLHLVVALRELAGGAAVQTVADTLGYESVNAFITMFKKALG 254
           S+ RL+L E GL+FGRWR+QLH++++L+ LA G +VQ VA  LGYE+ + FITMF+KA+G
Sbjct: 228 SMTRLLLEELGLSFGRWRRQLHVILSLQGLAKGESVQRVALDLGYENASGFITMFRKAVG 287

Query: 255 STPAQYFTQRRAKLSALSR 273
             PA+Y   R   LSA S+
Sbjct: 288 QPPARYLADRAGVLSATSQ 306