Pairwise Alignments

Query, 316 a.a., IS5 family transposase IS4811 from Azospirillum sp. SherDot2

Subject, 284 a.a., AraC family transcriptional regulator from Rhodanobacter sp. FW510-T8

 Score =  108 bits (269), Expect = 2e-28
 Identities = 89/305 (29%), Positives = 138/305 (45%), Gaps = 38/305 (12%)

Query: 3   VDPLAEVVSLLKPAAR-FSKFVECAGSWRIRREGTGEPFYCAILEGKCRMMVN-GHTPAV 60
           VD L+E++  L+   R F +   C G W +  E   +  +  +  G C +  + G     
Sbjct: 1   VDELSELMRHLRLQTRVFHRTAHC-GQWTLDGEYERKAMFHLVAGGSCVLRTDDGAADVA 59

Query: 61  LEAGDFVMVPAMQEFINESPVPPPPGVFERPAEIGPGQFRAGQFRAGCAEGSPDLRMQVG 120
           L+AGD V+    Q+    +P         R A+   G                   +  G
Sbjct: 60  LQAGDAVLFIRPQDHCLIAP---------RDADDTVGTL-----------------LLCG 93

Query: 121 HCVFDSPDAPLLVPLLPRTVIVRGEPRL--------LTVMQLVSDESQARRSARDLVLER 172
           +  FDSP A +L+  LP  +++R  P            ++QL+  E++       L++++
Sbjct: 94  YFEFDSPLAEVLLASLPAQMLLRHNPTPENMASGAPAALLQLIIAEAEQNGPGAMLLMDK 153

Query: 173 LLEVLLIEAFR-CAGSVDGAPGLARGLADPRLADALGAMHAEPGRSWTVAELAAEAGMSR 231
           L + L + A R C  S     GL   ++DP L  +L A+H +P   WTVA LA  A +SR
Sbjct: 154 LSDALFMYALRQCVTSGTVERGLLSAMSDPSLGASLLALHHDPQHPWTVAALADTAHLSR 213

Query: 232 SAFFARFDRVVGVAPMEYLLSWRMALAKQLLRDSEFGVEEVAERVGYSSANTFTVAFTRF 291
           +AF  RF + VGV PM+Y+   RM  A+  L +    V E A   GY++   F+ AF R 
Sbjct: 214 AAFARRFVQAVGVTPMDYVTGLRMQQAQSALAERGVSVAEAAVIAGYATEAAFSRAFKRI 273

Query: 292 QGVSP 296
            G SP
Sbjct: 274 HGRSP 278