Pairwise Alignments

Query, 316 a.a., IS5 family transposase IS4811 from Azospirillum sp. SherDot2

Subject, 312 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 12/253 (4%)

Query: 61  LEAGDFVMVPAMQEFINESPVPPPPGVFERPAEIGPGQFRAGQFRAGCAEGSPDLRMQVG 120
           L  GD V++P     +  S     P  F+     G  +   G F   CA    D      
Sbjct: 60  LTCGDAVLLPRGHAHVLGSGESVTPSPFDH---FGKKEVCQGVFDLQCASAGGDTVAFTA 116

Query: 121 HCVFDSPDAPLLVPLLPRTVIV----RGEPRLLTVMQLVSDESQARRSARDLVLERLLEV 176
              F+  +   L+ L+P  ++     + +P +  +++ ++ E +  R     +L RL +V
Sbjct: 117 SMRFNMDNLHPLLQLMPDVMLTSDLAKSDPAIPHLLEAMTREVELNRVGAGGILARLADV 176

Query: 177 L---LIEAFRCAGSVDGAPGLARGLADPRLADALGAMHAEPGRSWTVAELAAEAGMSRSA 233
           L   LI  +   G  D +  LA  + +P L   L A+H  P + W+V ELA+  G SRS+
Sbjct: 177 LTATLIRTWVEHGCGDSSGWLA-AVRNPELGRVLAAIHLNPEKDWSVEELASLMGASRSS 235

Query: 234 FFARFDRVVGVAPMEYLLSWRMALAKQLLRDSEFGVEEVAERVGYSSANTFTVAFTRFQG 293
           F  RF RVVG +P  Y++  RM  A+  LR+    V   AE++GY S  +F+ AF R  G
Sbjct: 236 FAERFTRVVGESPARYVVRVRMHQARLWLREG-MRVTVAAEKLGYDSEASFSRAFKRVLG 294

Query: 294 VSPARYSRSPETG 306
             P+++ R    G
Sbjct: 295 APPSQFRRKDAAG 307