Pairwise Alignments

Query, 280 a.a., N-acetylmuramoyl-L-alanine amidase AmiA from Azospirillum sp. SherDot2

Subject, 471 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  154 bits (388), Expect = 5e-42
 Identities = 89/216 (41%), Positives = 128/216 (59%), Gaps = 4/216 (1%)

Query: 53  RSRLVMLDPGHGGNDPGAIGTRGTFEKEVTLDIARDVARILAERHGVAVRLTRRDDRFLA 112
           R  +V++D GHGG DPGA G  G  EK V L IAR++ R +    G    LTR  D F+ 
Sbjct: 171 RDIVVVIDAGHGGEDPGASGGAGQKEKNVVLSIARELQRQVNAEKGYRAELTRTGDYFIP 230

Query: 113 LDDRVALTREAGADLFVSIHADSAPNADARGLSAYILSDKASDSFASR-LAQQENQADRF 171
           L  R  + R  GADLFVSIHAD+AP++ A G S + LSD+ + S  +R LA  EN++D  
Sbjct: 231 LRKRTEIARSKGADLFVSIHADAAPSSAAFGASVFALSDRGATSETARWLADSENRSDLI 290

Query: 172 GKPGAVG---GGRIVKDILMDLTARHTRHASLAARQILVEGAGKELRLLENPMRAANFAV 228
           G  GAV      R++  +L+DL+   +  +SL   Q ++   G+   L +  +  A F V
Sbjct: 291 GGAGAVSLDDKDRMLAGVLLDLSMTASLSSSLNVGQKVLSNIGRVTSLHKARVEQAGFMV 350

Query: 229 LKAPDVPSVLVETGFLSNPRDEEILRDATARRVVSR 264
           LK+PD+PS+LVETGF+SN  +   L  A+ ++ ++R
Sbjct: 351 LKSPDIPSILVETGFISNANEANKLGSASHQQALAR 386