Pairwise Alignments

Query, 341 a.a., Vitamin B12 import ATP-binding protein BtuD from Azospirillum sp. SherDot2

Subject, 333 a.a., murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF from Serratia liquefaciens MT49

 Score =  310 bits (793), Expect = 4e-89
 Identities = 158/325 (48%), Positives = 221/325 (68%), Gaps = 6/325 (1%)

Query: 16  ASAGNSVVLEARDLRKHYAV---KRGAFKPMATVKALDGVSFRLQAGKTLAVVGESGCGK 72
           A     V+LE  DL+ H+ +   K+  ++P  T+KA+DGV+ RL  G+TL VVGESGCGK
Sbjct: 3   AVTDKKVLLEVADLKVHFDIHDDKQWFWQPPKTLKAVDGVTLRLFEGETLGVVGESGCGK 62

Query: 73  STLARSVTMIEPPSSGELLYDGREVVGRSAAEMKELRRTVQMVFQNPYGSLNPRKTVGSI 132
           ST AR++  +   +SG + + G++++G S  + ++ R  +QM+FQ+P  SLNPR T+G I
Sbjct: 63  STFARAIIGLVKATSGRVAWLGKDLLGMSDVDWRKTRSDIQMIFQDPLASLNPRMTIGEI 122

Query: 133 LTEPL-VINTAMDKHERRDRAVAMMGKVGLRPDQVDRYPHMFSGGQRQRIAIARALMLSP 191
           + EPL      M + E +D+  AMM KVGL P+ ++RYPH FSGGQ QRI IARAL+L P
Sbjct: 123 IAEPLRTYYPKMPRQEVKDKVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEP 182

Query: 192 RVVVADEPVSALDVSIQAQVLNLMMDLQEELNLAYLFISHDLSVVRHIADSLMVMYLGKP 251
           ++V+ DEPVSALDVSIQAQV+NL+  LQ E+ L+ +FI+HDL+VV+HI+D ++VMYLG  
Sbjct: 183 KLVICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 242

Query: 252 VEHGAKDVVFTRPRHPYTRILLAATPRVNPDLRLDRVVP--KGELPSPLNPPPGCSFHKR 309
           VE G  D V+  P+HPYT+ L++A P  +PD   ++ +   +GELPSP+NPP GC F  R
Sbjct: 243 VELGTYDEVYHNPQHPYTKALMSAVPIPDPDKEKEKQIQLLEGELPSPINPPSGCVFRTR 302

Query: 310 CPFATERCSAEVPPLRTVDERLVAC 334
           CP A   C+   P L       V+C
Sbjct: 303 CPIAGPECAKTRPLLEGSFRHAVSC 327