Pairwise Alignments

Query, 784 a.a., Protein YhgF from Azospirillum sp. SherDot2

Subject, 778 a.a., RNA-binding transcriptional accessory protein from Dickeya dianthicola 67-19

 Score =  917 bits (2370), Expect = 0.0
 Identities = 487/779 (62%), Positives = 584/779 (74%), Gaps = 11/779 (1%)

Query: 3   SISQRIADELSVRESQVASAIAMLDEGSTVPFIARYRKEATGGLDDTQLRTLEERLGYLR 62
           ++SQ IA EL  R  QV++AI +LDEG+TVPFIARYRKE TGGLDDTQLR LE RL YLR
Sbjct: 4   ALSQIIASELQARNEQVSAAIQLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLSYLR 63

Query: 63  ELEDRRASILSTIQDQGKLTPELERQIKQADTKTRLEDLYLPYKQKRRTKAQIAREAGLE 122
           ELE+RR +IL +I +QGKLT  L   I    +KT LEDLYLPYK KRRT+ QIA EAGLE
Sbjct: 64  ELEERRQTILKSIDEQGKLTDALATSINTTLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 123

Query: 123 PLADALLADPKKQPDMEAAAFVSADKGVADVKAALDGARHILVERFGEDAELVGRLRTAM 182
           PLAD+L  DP + P++ A A+V+AD GVADVKAALDGAR+IL+ERF EDA L+ ++R  +
Sbjct: 124 PLADSLWNDPSQTPELVANAYVNADNGVADVKAALDGARYILMERFAEDAALLAKVRDYL 183

Query: 183 ADKGVVTSKVIEEKKAEGAKFSDYFDFSENWSKLPSHRALALFRGRAQGVLDIRLDLPVE 242
                + S+V+E K+ +GAKF DYFD  E  S++PSHRALA+FRGR +G+L + L+   +
Sbjct: 184 WKNAHLVSRVVEGKEEDGAKFRDYFDHRELLSQVPSHRALAMFRGRNEGMLQLSLNADPQ 243

Query: 243 EGQPHP---AEGTIAVHTGIRDQGRPADKWLSDVVRWTWKLKIGPHIETDLMGSLRERAE 299
             +P      E  I  H  +     PAD W   VV WTW++K+  H+ET+LMGS+RE+AE
Sbjct: 244 FDEPPKESHCEHIIVDHLRLCLGNAPADGWRRAVVNWTWRIKVLLHLETELMGSVREKAE 303

Query: 300 DEAIRVFARNLHDLLLAAPAGQRVTIGLDPGIRTGVKVAVVDATGKLVETTTIYPHPPRN 359
           DEAI VFARNLHDLL+AAPAG R T+GLDPG+RTGVKVAVVDATGKLV T TIYPH  + 
Sbjct: 304 DEAINVFARNLHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 363

Query: 360 DWDGSLAVLAALAARHKAELISIGNGTASRETDKLAADLMKRHPELSLTKLVVSEAGASV 419
               +  V+AAL  RH+ EL++IGNGTASRET++   D  K+ P++   K++VSEAGASV
Sbjct: 364 A--KAATVVAALCIRHQVELVAIGNGTASRETERFFLDTQKQFPDVKAQKVIVSEAGASV 421

Query: 420 YSASETAAHEFPTLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVAGGKLARS 479
           YSASE AA EFP LDVSLRGAVSIARRLQDPL+ELVKI+PKSIGVGQYQHDV+  +LA+ 
Sbjct: 422 YSASELAALEFPGLDVSLRGAVSIARRLQDPLSELVKIDPKSIGVGQYQHDVSQTQLAKK 481

Query: 480 LDAVVEDCVNAVGVDLNTASIPLLTRVSGLNETIARNIVEHRDRNGAFRSRKQLLDVARL 539
           LDAVVEDCVNAVGVDLNTAS+PLLTRV+GL   +A+NIV  RD NG F +R QLL V+RL
Sbjct: 482 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRLMAQNIVSWRDENGRFNNRDQLLKVSRL 541

Query: 540 GPKTFEQAAGFLRIRDSENPLDGSAVHPEAYPVVQRIVKTTGRDLGSVIGDARFLRGLNA 599
           GPK FEQ AGFLRI   +NPLD S VHPE YPVV+RI+  T + L  ++G++  LR L  
Sbjct: 542 GPKAFEQCAGFLRINHGDNPLDASTVHPETYPVVERILAATEQKLQDLMGNSSALRTLKP 601

Query: 600 EEFTDERFGVPTVEDIIKELEKPGRDPRPEFKTATFKEGVEELKHLQPGMMLEGVVTNVT 659
             FTD+RFGVPTV DIIKELEKPGRDPRPEFKTA+F +GVE L  L PGM+LEG VTNVT
Sbjct: 602 ASFTDDRFGVPTVTDIIKELEKPGRDPRPEFKTASFADGVETLNDLLPGMILEGAVTNVT 661

Query: 660 AFGAFVDIGVHQDGLVHISQLANSFVKDPHTVVKAGDVVKVKVLEVDIPRKRIALTMRMG 719
            FGAFVDIGVHQDGLVHIS LA+ FV+DPH VVKAGD+VKVKVLEVD+ RKRIALTMR+ 
Sbjct: 662 NFGAFVDIGVHQDGLVHISSLADRFVEDPHQVVKAGDIVKVKVLEVDLQRKRIALTMRLD 721

Query: 720 EEAPRPARREEQRRDERGPGRPPQQQDRRPAAPAAKAAPKPAKAPEPVNSAFAEAFARA 778
           E+       E   R + G  R    +  RP     KA P+ +  P   NSA ++A A A
Sbjct: 722 EQP-----GEGNSRRDGGRERDNGNKASRPPQAGNKARPRQSSTPAG-NSAMSDALAAA 774