Pairwise Alignments

Query, 250 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 260 a.a., Alkanesulfonates transport system permease protein from Pseudomonas fluorescens GW456-L13

 Score =  107 bits (267), Expect = 2e-28
 Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 3/243 (1%)

Query: 3   ALMPVVSILLLLALWQ--AAAMTVGGRLLPGPPVVAEALLREAESGALFHHMGVTLLRVL 60
           +L P    +LLLA+WQ   +A  +  R+LP P  V EA +    SG ++ H+ ++  R  
Sbjct: 7   SLAPWALPVLLLAVWQLSVSAGWLSTRILPAPIAVIEAGVSLVRSGEIWTHLAISGWRAA 66

Query: 61  AAFALAMSIGVGIGLPMGRSPVIDRLFGPWLVFFLNLPALVVIVLAYVWFGLTEAAAIGA 120
             F +   IG+ +G   G S   +RL    +    N+P L +I L  +WFG+ E+A I  
Sbjct: 67  LGFTIGGGIGLTLGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFL 126

Query: 121 VAINKIPNTVVLVRAGARAIDEGLVDMARVYRLSPADRLRHVLLPQLTPTIAAAARSGLA 180
           VA+  +    +    G R +D  LV+MAR Y LS       V+LP   P+I    R  L 
Sbjct: 127 VALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFWQVILPGALPSILVGVRFALG 186

Query: 181 LIWKIVLVVELLGRSDGVGFQINLLFQTFDVAGILAYTIAFVAVVQLLEYGVLQPAERHC 240
            +W  ++V E +  S G+G+ + +  + F    ++   I   AV+  L     +  ER  
Sbjct: 187 FMWLTLIVAETISASSGIGY-LAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVW 245

Query: 241 QRW 243
            RW
Sbjct: 246 LRW 248