Pairwise Alignments

Query, 318 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 315 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  145 bits (367), Expect = 1e-39
 Identities = 100/300 (33%), Positives = 157/300 (52%), Gaps = 7/300 (2%)

Query: 7   IAALAVAYVGVPLLFGGNAYVLGLIVAALTIAGVAVAWALLGNLGGMVSFGHAAFFGVGS 66
           +AALA+     PL F  N+Y   + V A+  A + V   LL    G +S GHA FF +G+
Sbjct: 11  LAALAIVITLAPLGFS-NSYFYDVGVNAMFNAILCVGLNLLIGYAGQISLGHAGFFALGA 69

Query: 67  YTSAVLAMKLGVPVFASMLLGG-VGAALSSIAMLPALRLRGPYFALAILAYAHIFQILTT 125
           Y S +L  + GVP   +++L   V   L+ +   P L+L+G Y A+A L    I  I+  
Sbjct: 70  YGSGILTERYGVPAIGALVLSASVVGILAFVVARPILKLKGHYLAMATLGIGIIIHIVLK 129

Query: 126 EMTPVTGGAGGLLSIPRFPKILGFDFGEKLGGYLIVLTIVVLAALAYDAIRRSTWGLALK 185
               +TGG  G+ S+  F K+LGF        Y +   ++VLA      +  S  G AL+
Sbjct: 130 TEAGITGGPDGM-SLGNF-KMLGFTIKGDQMWYWVTGVLLVLAVWLSLNLIESPVGRALR 187

Query: 186 AMHDTEVATRVVGVPSTHLKAAMLVLSAFITGVVGAFNAHFISFLDPDYAFSSGWTVLPI 245
           A+H +EV   VVGV ++  K  + V+SA    VVG+  AH   F+ PD + S   +V  +
Sbjct: 188 AVHGSEVGAEVVGVDTSSYKVLVFVVSAVFASVVGSLFAHKNGFITPDIS-SFFHSVELV 246

Query: 246 AAAIFGGYRTVWGPVVGALAIYLVDQLLFKPILPHGHQMILGVLLCAMILFSPGGLMPAL 305
              + GG  +++G ++GA+ + L+ Q+L    +     MILG ++   ++F P GL+P+L
Sbjct: 247 TMVVLGGMASIYGALIGAVILTLLPQVL--AAVEQYEAMILGAIMMGTMIFMPKGLLPSL 304