Pairwise Alignments
Query, 300 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 548 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1
Score = 69.3 bits (168), Expect = 2e-16
Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 23 AQELYTRILDVEPEQPDALHYLGVLAGQIDRGEFGLTLIGKALALRPEAADIHANRANLL 82
A +L +++ +P + A+ LG + R K A RP+ H N L
Sbjct: 60 AADLLAKVVKQDPGRIQAVITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLAL 119
Query: 83 RGLDRPNEAEDSYRRALALRPDFAEAWTDRAFARHDHGDPAAIDATATMLERALGIEPAL 142
RGL R +EA R + P W R G +D T LERA+ ++P
Sbjct: 120 RGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQG---RLDEAVTCLERAIQLDPGH 176
Query: 143 EPARERLVDLLHARGRLRLESGQVTPALADLIRAAALDQQDADISFLLGNALFAAGLRAD 202
A L L A+ R A++ L R AL D ++ + LG +L A AD
Sbjct: 177 SMAYNNLGVALQAQDR-------TEEAISVLERGLALQPDDPELHYSLGCSLQEATRTAD 229
Query: 203 SVIAFRNALALVPDFLSAALNLGIAL 228
+ ++R A+AL PD+ +A NL +L
Sbjct: 230 ATASYRRAIALRPDYGAAHWNLSHSL 255
Score = 59.3 bits (142), Expect = 2e-13
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 10/242 (4%)
Query: 29 RILDVEPEQPDALHYLGVLAGQIDRGEFGLTLIGKALALRPEAADIHANRANLLRGLDRP 88
R+L ++ A+H LG +A + L+ K + P L R
Sbjct: 32 RMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQAVITLGEAQLALSRF 91
Query: 89 NEAEDSYRRALALRPDFAEAWTDRAFARHDHGDPAAIDATATMLERALGIEPALEPARER 148
++A ++R+ A RPD + A G +D A +LER ++P++
Sbjct: 92 SDAAANFRKVAAARPDDPVPHYNLGLALRGLG---RLDEAAAVLERCRDMDPSVPAPWNV 148
Query: 149 LVDLLHARGRLRLESGQVTPALADLIRAAALDQQDADISFLLGNALFAAGLRADSVIAFR 208
L D+ A+GRL A+ L RA LD + LG AL A +++
Sbjct: 149 LGDIRRAQGRL-------DEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLE 201
Query: 209 NALALVPDFLSAALNLGIALAATNHAAAALAPLRHAVRIDPAHPAPRDTLALALRSLGHA 268
LAL PD +LG +L A A A R A+ + P + A L+ +L G
Sbjct: 202 RGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIALRPDYGAAHWNLSHSLLRGGDF 261
Query: 269 EE 270
E
Sbjct: 262 SE 263
Score = 57.0 bits (136), Expect = 1e-12
Identities = 32/91 (35%), Positives = 50/91 (54%)
Query: 18 GRFGEAQELYTRILDVEPEQPDALHYLGVLAGQIDRGEFGLTLIGKALALRPEAADIHAN 77
GR EA R + ++P A + LGV DR E ++++ + LAL+P+ ++H +
Sbjct: 157 GRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYS 216
Query: 78 RANLLRGLDRPNEAEDSYRRALALRPDFAEA 108
L+ R +A SYRRA+ALRPD+ A
Sbjct: 217 LGCSLQEATRTADATASYRRAIALRPDYGAA 247
Score = 53.5 bits (127), Expect = 1e-11
Identities = 37/140 (26%), Positives = 56/140 (40%)
Query: 149 LVDLLHARGRLRLESGQVTPALADLIRAAALDQQDADISFLLGNALFAAGLRADSVIAFR 208
L+ + R G + A A+ R +D+++ +LG+ F G A +
Sbjct: 6 LLQSMFQRAVQAFNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLA 65
Query: 209 NALALVPDFLSAALNLGIALAATNHAAAALAPLRHAVRIDPAHPAPRDTLALALRSLGHA 268
+ P + A + LG A A + + A A R P P P L LALR LG
Sbjct: 66 KVVKQDPGRIQAVITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRL 125
Query: 269 EEADVLVRPAPPQQPVKPAP 288
+EA ++ P PAP
Sbjct: 126 DEAAAVLERCRDMDPSVPAP 145
Score = 48.1 bits (113), Expect = 4e-10
Identities = 41/147 (27%), Positives = 55/147 (37%), Gaps = 7/147 (4%)
Query: 125 IDATATMLERALGIEPALEPARERLVDLLHARGRLRLESGQVTPALADLIRAAALDQQDA 184
++ A ER LGI+ R +H G + G A L + D
Sbjct: 23 LEMAAAECERMLGID-------RRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRI 75
Query: 185 DISFLLGNALFAAGLRADSVIAFRNALALVPDFLSAALNLGIALAATNHAAAALAPLRHA 244
LG A A +D+ FR A PD NLG+AL A A L
Sbjct: 76 QAVITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLERC 135
Query: 245 VRIDPAHPAPRDTLALALRSLGHAEEA 271
+DP+ PAP + L R+ G +EA
Sbjct: 136 RDMDPSVPAPWNVLGDIRRAQGRLDEA 162
Score = 45.1 bits (105), Expect = 4e-09
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 10 LALDLHLAGRFGEAQELYTRILDVEPEQPDALHYLGVLAGQIDRGEFGLTLIGKALALRP 69
L L L GR EA + R D++P P + LG + R + +T + +A+ L P
Sbjct: 115 LGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQLDP 174
Query: 70 EAADIHANRANLLRGLDRPNEAEDSYRRALALRPDFAEAWTDRAFARHDHGDPAAIDATA 129
+ + N L+ DR EA R LAL+PD E + + A DATA
Sbjct: 175 GHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATRTA--DATA 232
Query: 130 TMLERALGIEP 140
+ RA+ + P
Sbjct: 233 S-YRRAIALRP 242
Score = 39.7 bits (91), Expect = 2e-07
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 28/215 (13%)
Query: 73 DIHANRANLLRGLDRPNEAEDSYRRALALRPDFAEAWTDRAFARHDHGDPA-AIDATATM 131
++ A + G+DR N A ++A R GDPA A D A +
Sbjct: 24 EMAAAECERMLGIDRRNTAAMHILGSVAFR----------------RGDPAGAADLLAKV 67
Query: 132 LERALGIEPALEPARERLVDLLHARGRLRLESGQVTPALADLIRAAALDQQDADISFLLG 191
+++ +P R + V L G +L + + A A+ + AA D + LG
Sbjct: 68 VKQ--------DPGRIQAVITL---GEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLG 116
Query: 192 NALFAAGLRADSVIAFRNALALVPDFLSAALNLGIALAATNHAAAALAPLRHAVRIDPAH 251
AL G ++ + P + LG A A+ L A+++DP H
Sbjct: 117 LALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQLDPGH 176
Query: 252 PAPRDTLALALRSLGHAEEADVLVRPAPPQQPVKP 286
+ L +AL++ EEA ++ QP P
Sbjct: 177 SMAYNNLGVALQAQDRTEEAISVLERGLALQPDDP 211
Score = 32.3 bits (72), Expect = 3e-05
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 10 LALDLHLAGRFGEAQELYTRILDVEPEQPDALHYLGVLAGQIDRGEFGLTLIGKALALRP 69
L + L R EA + R L ++P+ P+ + LG + R +A+ALRP
Sbjct: 183 LGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIALRP 242
Query: 70 EAADIHANRA-NLLRGLD 86
+ H N + +LLRG D
Sbjct: 243 DYGAAHWNLSHSLLRGGD 260