Pairwise Alignments

Query, 1137 a.a., Transcription-repair-coupling factor from Azospirillum sp. SherDot2

Subject, 1164 a.a., transcription-repair coupling factor from Paraburkholderia sabiae LMG 24235

 Score =  524 bits (1350), Expect = e-152
 Identities = 384/1124 (34%), Positives = 562/1124 (50%), Gaps = 75/1124 (6%)

Query: 50   LLARSDARATRLARLVGDLFPDLDTILLPIDETAAGDRAAPSRAVLGRRAAGLMRLAERG 109
            ++  S   A RL++ +    P+    LLP  ET   D  +P + ++  R A L  L E  
Sbjct: 55   VVCASAVDAQRLSQELAFFAPNARVRLLPDWETLPYDSFSPHQDLVSERLATLHDLGE-- 112

Query: 110  EPASGR--LVVASADLALQRVPPPQAWAGGHFRLTRGMAYDEAAWRGWFARTGYVMDDRV 167
                GR  +++  A  AL R+PP    A   F  ++G   DEA  +      GY    +V
Sbjct: 113  ----GRCDILLVPATTALYRMPPASFMAAYTFSFSQGERLDEAKLKAQLTLAGYEHVSQV 168

Query: 168  DEPGEVAIRGAVVEVFPGHCDRPVRCDIADGVVRDLRLYDPVSQRSVESIDELALGPVTD 227
              PGE  +RG+++++FP     P R D+ D  V  +R +DP SQRS+  + ++ L P  +
Sbjct: 169  VRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDSQRSLYPVKDVRLLPGRE 228

Query: 228  LIVGPEMLDRLAASLARL-------GSALPEGLRRELEEGRRPYAFDLQLPNVFDDCPLL 280
                    D  A +  R        G      + +++  G      +  LP  F++   L
Sbjct: 229  F-----PFDEAARTAFRSRWREVFEGDPSRASIYKDIGNGVPSAGIEYYLPLFFEETATL 283

Query: 281  LDLLPEALVVLDAGARDRIEAR--ADDLAEAGIDRRIRRDDPCLLPVPPLERRLIDADA- 337
               LP+A  ++  G  D    R  AD     G      RD P L P     +RL  +D  
Sbjct: 284  FHYLPDASQLVFVGDLDAAIKRFTADTKQRHGFLSH-DRDRPILEP-----KRLFLSDDD 337

Query: 338  --LDEKLAARTLLPVEVTNGPVVEAVR------TERTLLRRSVGLVGEGRAVLLAARSGA 389
                 K  AR  LP     G  V           +  +      L      VL AA S A
Sbjct: 338  FYTFAKPFARLSLPGNAGGGWAVPLPNLAIDRHADDPVSALRAWLATTPNRVLFAAES-A 396

Query: 390  GEADRLAERMSSALGRPVPR--LDRW--PEPPLAAGDCAVLALRSAGGFTCDGMTVLV-- 443
            G  + +A+ ++    RP      D W   +   A G   V  L +      +G+ +L   
Sbjct: 397  GRRETIAQLLADNELRPASADSYDDWLTSDARFALG---VAPLSNGFAVPAEGIAILTET 453

Query: 444  ---------APRHAEERGG--EAQVRPPLAPSELSTGDFVVHLDYGIGRLIGLETIASGD 492
                     A R  +E+    ++ VR     SEL  GD VVH  +GIGR +GL T+  G+
Sbjct: 454  ELYGPLARKAGRRRQEQASNVDSMVRDL---SELKVGDPVVHSQHGIGRYMGLVTMDLGE 510

Query: 493  GEDDTADFLVLDYAHDDRLLVPTADFDRLWRHGSADT-GAKLDSLKNAHWLERRAVLEAE 551
            GE    +FL L+Y  D +L VP +    + R+  AD   A L SL +  W + +     +
Sbjct: 511  GE---TEFLHLEYQGDSKLYVPVSQLHVISRYSGADPESAPLHSLGSGQWEKAKRKAAQQ 567

Query: 552  IGETAKGILR-EARRRARESAPVIDPPVDRMRRFGARFGFDPTEGQRRAIQTVLDAMRQG 610
            I +TA  +L   ARR  RE       P D ++ F   FGF+ T  Q  AI  V+  M  G
Sbjct: 568  IRDTAAELLNLYARRALREGHAFALDPRDYVK-FAESFGFEETPDQAAAIAAVIGDMTSG 626

Query: 611  QPMDHLVCADVGYGKTEVALRAAAAVAFAGHQVAVMAPTSVLARQHLEVFRRRFAGFGIR 670
            +PMD LVC DVG+GKTEVALRAA      G QVA+++PT++LA QH + F  RF+ + +R
Sbjct: 627  KPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFTDRFSDWPVR 686

Query: 671  LEPLTGAMTKTESDRVRAGLADGSVDIVIGTHALLSKDVRFQRLGLMVVDEEQRFGATQK 730
            +  L+   T  E       + +GSVDIVIGTH LLS DV+F+RLGL+++DEE RFG  QK
Sbjct: 687  IAELSRFKTGKEVSASIQQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQK 746

Query: 731  QALKRRIKGVHSLALSATPIPRTLQGALAGLRGLSIIDTPPARRRPVRTAVTPRDPTTAR 790
            +ALK     V  L L+ATPIPRTL  AL GLR  S+I T P +R  ++T V   +    R
Sbjct: 747  EALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDGVIR 806

Query: 791  AALLRELGRGGQVFCVTPRIADLGELEEWIRGLVPSACIAVAHGRLGAAALDDAVMGFVD 850
             A+LREL RGGQV+ +   +  +    + +  LVP A IAVAHG++    L+  +  FV 
Sbjct: 807  EAMLRELKRGGQVYFLHNEVETIENRRQMLEALVPEARIAVAHGQMHERELERVMRDFVA 866

Query: 851  GESDILLATPIIESGIDIPRANTLLLFRPDLFGLGQLHQLRGRVGRGAVQGYAYLLTDPD 910
              +++LL T IIE+GID+P ANT+L+ R D FGL QLHQLRGRVGR   Q Y+YLL    
Sbjct: 867  QRANVLLCTTIIETGIDVPSANTILIHRADKFGLAQLHQLRGRVGRSHHQAYSYLLVHDP 926

Query: 911  HPLEERAARRLGSLEVIESLGGGFVLSMLDLDQRGAGDLLGEDQSGHLRAVGTELYQRIL 970
              L ++A RRL +++ +E LG GF L+M DL+ RG G++LG+ QSG +  +G +LY  +L
Sbjct: 927  QGLTKQAQRRLEAIQQMEELGAGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDML 986

Query: 971  ADALRALR--RQPD----ARWDPEVTVAVPHGIPSAYIPEEELRIGLHRRIARTREAGEL 1024
             DA++AL+  ++PD         E+ +  P  +P+ Y  + + R+ L++R+A       +
Sbjct: 987  NDAVKALKNGKEPDLTAPLAATTEINLHTPAILPADYCGDVQERLSLYKRLANCEHNDSI 1046

Query: 1025 DALREEMEDRFGPLPVPMERLLAIAGLRCRCRALGIASLGCGPAGVAVTL--RGERASAR 1082
            D ++EE+ DRFG +P     L+    LR   + LGI+ +  G A +A+         + R
Sbjct: 1047 DGIQEELIDRFGKMPPQAHALVETHRLRLAAKPLGISKIDAGEAVIALQFVPNPPVDAMR 1106

Query: 1083 AATLAKRSKGVLRAQDDRLSAALEAPDAESRLANASRVLDCIET 1126
               + ++ K +  A  D+L     +PD   R++     L  + T
Sbjct: 1107 IIEMVQKHKHIKLAGQDKLRIETRSPDFTVRVSTVKETLRALGT 1150