Pairwise Alignments

Query, 553 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 802 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  240 bits (613), Expect = 1e-67
 Identities = 161/457 (35%), Positives = 243/457 (53%), Gaps = 16/457 (3%)

Query: 98  GGWTAVAEALRPLYREGTADSPASPPDSVRLTLPSEPPIGLRATPLLVDGRVVGVLATAT 157
           G  T   +A+  L+   T D      D        +P  G   T   VDG V+  +  + 
Sbjct: 142 GDGTLQTDAMATLHDGNTIDREIGGSDGRWYVRRVKPYRGESKT---VDGVVITFIDVSA 198

Query: 158 LDGAIAQMAETMRAEVARTTAARSRFLASASHDLRQPFQAMRLFLDALTNQVEGNARASR 217
              A A+  E  +    R T A+SRFL++ASHDLRQP Q ++L L  L  +  G  RA  
Sbjct: 199 QKQA-AESREAAKKSAERATEAKSRFLSAASHDLRQPLQTLKL-LQGLLERSVGEGRART 256

Query: 218 TAGMLANAMTAGEQLLNALLDISTLDAGTVEADLQAVPLDALLQSLADEFRPQAEEKGLR 277
               +   +++   +L++LLDI+ ++AG VE  +    +  LL  L  EF   A   GL+
Sbjct: 257 FVQRMEETLSSMSGMLDSLLDINQIEAGMVEPQVVNFAIGNLLGLLFKEFYYPARAAGLQ 316

Query: 278 LRVHLPCRAVTRSDPVLLGRIVRNLLANAIRYTQRGGILLGLRKRDGRWRIEVWDTGFGI 337
           L V +P     R+DP L  +IVRNLL+NA++YT  G IL+G R+R  + R EVWDTG GI
Sbjct: 317 LHV-VPSSLAVRTDPRLFEQIVRNLLSNALKYTTSGKILVGCRRRGTKVRFEVWDTGIGI 375

Query: 338 PQDKLDVIFDEFHQLTNPARDPTRGLGLGLAIVRRLSVLLSAPIDVQSRSGRGSVFAVTV 397
           P+ +++ +F E+ QL   A    RGLGLGL+IV+RLS LL   + V+SR  +GSVF +  
Sbjct: 376 PESQIEDVFQEYLQLDASAGTEDRGLGLGLSIVKRLSELLELRVAVRSRLHKGSVFMI-- 433

Query: 398 ERLEAEEAPADAPAVAASA---GQGAAAVPLDGMRILVVDDDSMVLSGLLLTLESWGCAF 454
              E ++APA  P V   A   G+      L    +L+++D++ +   L + LE  G   
Sbjct: 434 ---EIDQAPAGEPLVPLRAPVDGRPHHTTALSSASVLIIEDENGMRDLLKMGLEQSGYVV 490

Query: 455 VSASNMREVFAAVDGLEGPPDAILTDLRLPGKVSGFDVIDRVRKLFKTDIPAVVLTGETA 514
            + S   E  A V GL+  PD IL D   P   +G   I+ +R+  + ++PA++LTG+ +
Sbjct: 491 AATSTGAEALAIVRGLQFKPDVILADYNFPTGGNGIAAIEDIRQALRRNVPALILTGDIS 550

Query: 515 PESLLEGQRRGCAFLHKPLHPGDLRRVLEE--VRRDG 549
            ++L    +    +LHKP+   D+ +V+E   VR+ G
Sbjct: 551 SKALTTFAQHEIPYLHKPVKLKDVVQVVETLVVRQTG 587