Pairwise Alignments

Query, 312 a.a., Chemotaxis protein PomA from Azospirillum sp. SherDot2

Subject, 253 a.a., Chemotaxis protein PomA from Alteromonas macleodii MIT1002

 Score =  169 bits (429), Expect = 5e-47
 Identities = 98/250 (39%), Positives = 146/250 (58%), Gaps = 3/250 (1%)

Query: 50  LDVATLVGLAAAAGVILIAITTGGSARAFLDPPSLLIVLGGTLAVTTASFSLGDVAVAWK 109
           +D+AT++G+  A G I++A+  GGS   F+D  S+LIV GGTL V  + F+LG    A K
Sbjct: 1   MDLATVIGMLGAIGFIVMAMILGGSLGMFIDVQSILIVFGGTLFVVLSQFTLGQFFSAGK 60

Query: 110 NAAAVLVHQTLDPKGVARQVLLLAEAARRAGPETLRNVLPELRAEPFLHRSVTLITEGLP 169
            A    + +   P+ +  +++ +A+AAR+ G   L     E+  E F+ + V ++ +G  
Sbjct: 61  VAGKAFMFKIETPEELIEKIVEMADAARKGGFLALEEA--EISNE-FMQKGVDMLVDGHD 117

Query: 170 PDAIERMLTGEVEATVGGHGKSAGVLRRASEVAPAMGLIGTLVGLVQMLGSLSDPSAIGP 229
            + +   L  ++  T   H   A + +   +VAPAMG+IGTL+GLV ML ++ DP AIGP
Sbjct: 118 IEVVRETLAKDISMTTERHEFGASIFKGMGDVAPAMGMIGTLIGLVAMLSNMDDPKAIGP 177

Query: 230 AMALALLTTFYGAVLGNVVLSPLAAKVERAAEEDALVKTLYTIGAVSIARQENPRRLEML 289
           AMA+ALLTT YGA   NVV  P+A K+   A E+ L ++L   G V IA  +NPR +E +
Sbjct: 178 AMAVALLTTLYGAFFANVVCLPIAFKLAVRAGEEKLNQSLVLDGIVGIADGQNPRVIEGV 237

Query: 290 LNAVLPPGKR 299
           L   L   KR
Sbjct: 238 LKNYLAASKR 247