Pairwise Alignments

Query, 338 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score =  155 bits (391), Expect = 2e-42
 Identities = 108/333 (32%), Positives = 157/333 (47%), Gaps = 31/333 (9%)

Query: 11  ALAAALTTVVTPAAAAEPTA------------ICYNCPPEWADWASQLKAIKADLG-IAV 57
           A   AL    T  AAAEP+A                 P +W  +   + A KA    I V
Sbjct: 10  ATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEITV 69

Query: 58  PFDNKNSGQA--MAAMLAEKDKP---VADVAYLGGPVGIQAKAAGVVTPYKPAGWTDIPD 112
              N ++G A  + A+ A KD       DV  +G   G Q KA G++ PYK + W +IPD
Sbjct: 70  NELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIPD 129

Query: 113 GMKDADGNWFAIHSGTLGFFVNSEALGGKPVPQSWADLLKPDYSGMVGYL-DPTSAAVGY 171
            +KDADG W+  + G +  FVN + +  K VP+ WADLLKP+YSG V    DP ++    
Sbjct: 130 NVKDADGYWYGDYYGVMSMFVNKDLV--KNVPKDWADLLKPEYSGQVALAGDPRASNQAI 187

Query: 172 VGAVAVNLALGGDYG--SFDKAVGWFKDLQKNQPIVPKQTSYARVLSGEIPILIDYDFNA 229
           +G +A  L+ G   G  + +  + +F DL K    +P       +  G  PI++ +D+NA
Sbjct: 188 LGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPIIVAWDYNA 247

Query: 230 YRAKYT--DKAPVAFVIPTEGTVSVPYVMALVKNGPNPENGKKVLDYVLSDKGQTLWANA 287
              K T  D  P   V+P +G ++  YV  +    P+P   K  ++++ SD GQ  W   
Sbjct: 248 LSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGWLKG 307

Query: 288 FMRPVRAEAM------SAETAAKFLPAADYARA 314
           +  P+R  AM        E      PAA Y +A
Sbjct: 308 YCHPIRFNAMVKAGKVPQELIDSLPPAAAYEKA 340