Pairwise Alignments

Query, 266 a.a., HTH-type transcriptional regulator XynR from Azospirillum sp. SherDot2

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 12/247 (4%)

Query: 21  TGRARGIDRVIALMEHLHDRRAPTRIADIARDTGTPRSTMYELVNTLVEARWLELRDGDG 80
           T  ARG+    A+++   +R+    IA I+  T  PR+ +   ++TL++   L     DG
Sbjct: 46  TSLARGL----AVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIK---LGYATTDG 98

Query: 81  TVY-FGPAMHYYGSDYLDSVDLIRKARVEVAHIAETVGETAQFCTLDGDKYLVVLNEPG- 138
             Y   P +   G  YL S  L   A+  +  I++ + E A   TL+GD  L +      
Sbjct: 99  RTYSLLPKVLTLGHAYLSSTPLAISAQPYLDRISDQLHEAANMATLEGDDILYIARSATV 158

Query: 139 RRMFRISSEIGIKVPIPWTASGRLLVDHLDAEEIRRFIPPEDFTLPDGRRIAEDEFL-ED 197
            R+  +   +G ++P   T+ GR+L+  +D   +R ++   D      R + + E L   
Sbjct: 159 ERLISVDLSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPESLFAC 218

Query: 198 MHRARTQGYVRTTALVDRFTTCLAAPVRDPSGRCIA--TICFVVPADTTEEAQQVMIDTL 255
           + + R QG+      +++    +A PV D SG+ +A   +   V   T  E +Q  +  L
Sbjct: 219 IQQVRAQGWCVVDQELEQGLRSIAVPVYDASGQVLAALNVSTHVGRVTRSELEQRFLPIL 278

Query: 256 KASAERL 262
            A++  L
Sbjct: 279 LAASRDL 285