Pairwise Alignments

Query, 295 a.a., HTH-type transcriptional activator CmpR from Azospirillum sp. SherDot2

Subject, 304 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  115 bits (289), Expect = 9e-31
 Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 11/285 (3%)

Query: 15  VVEHGGFTEAAGRLGLTQPAVSMQIRNLEERFGVRLVERVGKRALPTAAGRDLLPFIRRL 74
           V +HG FT AA  L ++QPA+S QIR LE   GV+L +R  +  +PT AGR  L   RR 
Sbjct: 24  VADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGRVYLDHARRC 83

Query: 75  REEMEAASAAMGRHRAGQVGRVRIGTGATACIYRLPPILTALRSAHPGLEIIVVTGNTPD 134
             E++A   A+        G++R+G   T   Y + P++    + +PG+ II+       
Sbjct: 84  LLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAIILTELPLEQ 143

Query: 135 ILDAVEGGTLDLALVTLPAGRPGLSIEPVCAEELVCVGPRGEAPPPDRTVAPAALADETL 194
           I +A+    LDLA+    +    +  +P+  E+L  V     A P     A   L D   
Sbjct: 144 ITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLCLV----MAKPASEKQAALTLEDLQA 199

Query: 195 I---LYERGGTMRAVIDGWFMAGGIQPRPSMELGNVEAIKNLVAAGLGRSILPSVTV-AG 250
           +   L   G   R ++D W      +P   +E  ++  +  +VA G   +ILP   V   
Sbjct: 200 LRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGRMATILPDAIVRKQ 259

Query: 251 PQDCDRFAVQTLTPPLIRTLGLVLRRDKVLNAGVRAMVKAITDIR 295
           P  C+   VQT+     RT+ L+ R++   +A  +A  K ++DIR
Sbjct: 260 PGLCE---VQTIPALPGRTVALLRRKNGYQSAAAKAFAKLVSDIR 301