Pairwise Alignments

Query, 340 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 343 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 28/334 (8%)

Query: 3   KKLLAT--LALGLCLGGTASADT------NIKFTLGWKTQGSDAPFLLALQKGYFKAEGL 54
           + LL T  +A GL  GG  S D        I   LGW   G+    ++A + G+++ EG+
Sbjct: 10  RSLLKTSLIAGGLSAGGLLSVDAFAQGKARINMQLGWIVGGNQIGEVVAKRMGFYEQEGI 69

Query: 55  NVTIDQGEGSAATVTRIMSGAYDAGFGDINAIIQNAATRPGDVPVMVYQLW-NKPPFAIV 113
           +  I  G  +   V  I SG Y+ G    +  I  A ++   +P+  + +   K P+   
Sbjct: 70  DFAIQPGGPNIDGVAIIASGRYEVGQVSSSPSIMLAVSQ--GLPIKCFAVGAQKHPYTYF 127

Query: 114 SKKATNIATPADLVGKKLGGAQGTPTTR--LVTVLGTLNKVDMTKVAIENMGPNLQEPML 171
           S     +  PADLVGK++    G P+T   L+  L   NK+    V + ++G ++    L
Sbjct: 128 SLAKNPVRKPADLVGKRV----GIPSTAGILLRALLAKNKIAEKDVKVVSIGADMSP--L 181

Query: 172 IKGDIDGALVFNITSWFNLINNRQDPAKDYNWLLFGDFGLDLYSNGMMVSQKLIRENPAA 231
           + G +D      +T W       +    D   L   D G+ LY+     S K +   P  
Sbjct: 182 LTGQVD-----VVTGWLTNTTAIKVLGPDIASLTQWDAGVRLYALPYYASTKTLETQPKV 236

Query: 232 VSGLVRAVNKAAVEIGGDPAAGL-KAVLAYDNLAKEELERARMIFSYEHLIVSPEVDRLG 290
           +   +RA  K    +  +  A +   V  Y NL +E+ ER  +    E+          G
Sbjct: 237 IEAFLRATAKGWHHVRANRDAAVDMLVKEYPNLKRED-ERVAVDAMLEYAF-GGLAQTQG 294

Query: 291 LGDVDDARLARSIGIVVEGYQLTA-TPKPEQVFT 323
            G +D A     I    E  Q TA TPK E V +
Sbjct: 295 WGAMDPAVWQEQIDTYAELGQFTARTPKVEDVIS 328