Pairwise Alignments

Query, 340 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 338 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  102 bits (254), Expect = 1e-26
 Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 16/323 (4%)

Query: 10  ALGLCLGGTASADTNIKFT--LGWKTQGSDAPFLLALQKGYFKAEGLNVTIDQGEGSAAT 67
           AL   L  TASA    KFT  L W   G  A + +AL KGY+   GL+VT++  +GS  +
Sbjct: 15  ALFALLPATASAQAKEKFTFALNWFAVGDHAAYWVALDKGYYAQRGLDVTLENSKGSGDS 74

Query: 68  VTRIMSGAYDAGFGDINAIIQNAATRPGDVPVMVYQLWNKPPFAIVSKKATNIATPADLV 127
           + ++ +   DAG  D   +I +AA+R   V  MV  +++K P    S     +  P DL 
Sbjct: 75  IAKVDTSRADAGLADAVPVI-SAASRGARVK-MVGMVFDKTPMTFFSHADAPLLKPKDLE 132

Query: 128 GKKLGGAQGTPTTRLVTVLGTLNKVDMTKVAIENMGPNLQEPMLIKGDIDGALVFNITSW 187
           GK +    G            LN++D  KV+  N+ P  +   + +  +DG  V + T+ 
Sbjct: 133 GKTVAAPAGDSQRLAFPAFARLNQIDPNKVSWVNIEPTAKVASIAEKRVDG--VADYTTG 190

Query: 188 FNLINNRQDPAKDYNWLLFGDFGLDLYSNGMMVSQKLIRENPAAVSGLVRAVNKAAVEIG 247
               +    P K    L + D+G DLY+  ++  +K + + P  +   + A      ++ 
Sbjct: 191 QPFYDKAMGPGKAVR-LQWADYGFDLYAMSIIAGEKTMADKPKQLKAFLEASYMGWRDVM 249

Query: 248 GDPAAGLKAVLAYDNLAKEELE----RARMIFSYEHLIVSPEVDRLGLGDVDDARLARSI 303
            +P    K  LA       E++     A M+  ++ +      D  G+G +D+ ++  S 
Sbjct: 250 ANP----KEALAIFKKRVPEIDVAIIEANMMMGFDLMRTKGYADN-GIGWIDEKKMCAST 304

Query: 304 GIVVEGYQLTATPKPEQVFTRRF 326
            IV     L    + + VF+  F
Sbjct: 305 DIVNTYMGLPKKVECKAVFSGEF 327