Pairwise Alignments

Query, 545 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 294 a.a., branched-chain amino acid ABC transporter permease from Ralstonia solanacearum UW163

 Score =  167 bits (422), Expect = 6e-46
 Identities = 103/293 (35%), Positives = 162/293 (55%), Gaps = 16/293 (5%)

Query: 248 AALQNLWYGLSLGSVLLLAAIGLAVTFGVMGVINMAHGEMVMIGAYTTFLVQEFFRAHAP 307
           A L  L  GL  GS   + ++GLAV FG++ VIN AHG + M+GA  T++   +      
Sbjct: 10  AMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLSYL----- 64

Query: 308 GLFDLSILVALPAAFLVSGGVGIVIERSVIRWLYGRP-LETLLATWGLSLALQQAVRSIF 366
              DL   V L AA L  G VG+VIER+++R++Y    L  LL T G++L ++   R+I+
Sbjct: 65  ---DLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIY 121

Query: 367 GPTNREVGAPSWMSGAFELGGLTITYGRLWIVVFAFTVFAALLVALKRTWFGLSIRAVTQ 426
           G +      P  +SGA +LG + +   R W+VV + TV  A    +++T  G  +RA T+
Sbjct: 122 GVSGLPYSTPELLSGATDLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKLGAYLRAGTE 181

Query: 427 NRPMANAMGIRTARVDALTFGLGSGIAGLAGVALSQIDNVSPNLGQGYILDSFMVVVFGG 486
           N  +  A G+    +  LT+G G  +A  AGV  + +  +SP +GQ  I+  F VVV GG
Sbjct: 182 NPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQISPLMGQNMIITVFAVVVIGG 241

Query: 487 VGNLWGTLVGALTLGT---MNKFLEPYAGAVLGKILVLIFIILFIQRRPRGLF 536
           +G++ G+++  L LG    + K   P A + +  + V++ ++L +  RP GLF
Sbjct: 242 MGSILGSIITGLGLGVIEGLTKVFYPQASSTV--VFVIMALVLLV--RPAGLF 290