Pairwise Alignments

Query, 293 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 317 a.a., substrate-binding domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  159 bits (403), Expect = 6e-44
 Identities = 106/295 (35%), Positives = 163/295 (55%), Gaps = 9/295 (3%)

Query: 4   LLTAATVAATALLASANAQAADT-IALVVSTLNNPFFVTLKNGAEAKAKALGYNLLVLDS 62
           L  AA + A  L A A A AA   I +    LNNP+FVT++      A ++G  ++V D+
Sbjct: 19  LAFAAVMLAAPLFAPATANAAPLKIGMTFQELNNPYFVTMQKALNDAAASIGATVVVTDA 78

Query: 63  QNDPAKELANVEDVVNKKVKLLLVNPTDSDAVRSAVRSANRAKIPVVTLDRSANGGEVAS 122
            +D +K++++VED++ KK+ +LLVNPTDS  ++SAV SA +A   VV +D +AN G V S
Sbjct: 79  HHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVTSAKKAGAVVVAVDANAN-GPVDS 137

Query: 123 HIASDNVAGGRMAGQLVVDMLKGQGAVVELQGLPGASAARDRGKGFHEAVDKASGLKVVA 182
            + S N   G+M+ + +   + G G V  L G+P      +R +G   A+ K   +KVV 
Sbjct: 138 FVGSKNFDAGQMSCEYLAKAIGGSGEVAILDGIP-VVPILERVRGCKAALAKFPNVKVVD 196

Query: 183 SQPADFDRTKALNVMENILQAQQKIDVVFAHNDEMALGAAKAIQASGRKIPVVGFDGTDE 242
           +Q    +R  AL+V EN++QA   +  +F+ ND  ++GA  AI++SG+ I +   DG  E
Sbjct: 197 TQNGKQERATALSVTENMIQAHPNLKGIFSVNDGGSMGALSAIESSGKDIKLTSVDGAPE 256

Query: 243 GVAAVNA--GTLTATVAQ--QAGLIGEKGVETADKVLKGEKVPAFTPVELKMVTK 293
            + A+         T AQ  +  +    GV  A K   G  VP   PV++K+V K
Sbjct: 257 AITAIQKPNSKFIETSAQFPRDQIRLAIGVALAKK--WGANVPKAIPVDVKLVDK 309