Pairwise Alignments

Query, 293 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 295 a.a., ribose ABC transporter substrate-binding protein RbsB from Pectobacterium carotovorum WPP14

 Score =  327 bits (838), Expect = 2e-94
 Identities = 172/295 (58%), Positives = 223/295 (75%), Gaps = 4/295 (1%)

Query: 1   MRKLLTAATVAATALLASANAQAADTIALVVSTLNNPFFVTLKNGAEAKAKALGYNLLVL 60
           M+KL T  +  A +   SANA A DT+ALVVSTLNNPFFV++K GA+ +A  LGY L+VL
Sbjct: 3   MKKLATLVSAVALSATVSANALAKDTVALVVSTLNNPFFVSMKEGAQKEADKLGYELIVL 62

Query: 61  DSQNDPAKELANVEDVVNKKVKLLLVNPTDSDAVRSAVRSANRAKIPVVTLDRSANGGEV 120
           DSQN+PAKELANV+D+  +  K+LL+NPTDSDAV +A++ AN+AKIPV+TLDR A+ GEV
Sbjct: 63  DSQNNPAKELANVQDLTVRGTKVLLINPTDSDAVGNAIKMANQAKIPVITLDRVASSGEV 122

Query: 121 ASHIASDNVAGGRMAGQLVVDMLKGQGA-VVELQGLPGASAARDRGKGFHEAVDKASGLK 179
            SH+ASDN  GG++AG  +   L G+GA V++L+G+ G SAAR+RG GF ++ +K +   
Sbjct: 123 VSHVASDNAFGGKVAGDFIAKKL-GEGAKVIQLEGIAGTSAARERGAGFMKSAEK-NKFA 180

Query: 180 VVASQPADFDRTKALNVMENILQAQQKIDVVFAHNDEMALGAAKAIQASGR-KIPVVGFD 238
           ++ASQPADFDRTK LNVM+N+L A   +  VFA NDEMALGA +A+Q +G+  + VVGFD
Sbjct: 181 MLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKTDVLVVGFD 240

Query: 239 GTDEGVAAVNAGTLTATVAQQAGLIGEKGVETADKVLKGEKVPAFTPVELKMVTK 293
           GT +GV AV +G L ATVAQ+   IG  G+ETA KVLKGEK  A  PV+LK+V K
Sbjct: 241 GTQDGVKAVESGKLAATVAQRPDQIGVIGIETAAKVLKGEKTQAIIPVDLKLVAK 295