Pairwise Alignments

Query, 293 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 293 a.a., ribose ABC transporter substrate-binding protein RbsB from Erwinia amylovora T8

 Score =  315 bits (808), Expect = 6e-91
 Identities = 172/295 (58%), Positives = 219/295 (74%), Gaps = 6/295 (2%)

Query: 1   MRKLLTAATVAATALLASANAQAADTIALVVSTLNNPFFVTLKNGAEAKAKALGYNLLVL 60
           ++K    A +A + L ASA AQ  +TI LVVSTLNNPFFV+LK GA+ +A  LGY+L+VL
Sbjct: 3   IKKWTALALLAGSTLSASALAQ--ETITLVVSTLNNPFFVSLKEGAQKEADKLGYHLVVL 60

Query: 61  DSQNDPAKELANVEDVVNKKVKLLLVNPTDSDAVRSAVRSANRAKIPVVTLDRSANGGEV 120
           DSQN+PAKELANV+D+  +  KLLL+NPTDSDA  +AV+ AN+A IPV+TLDR A  G+V
Sbjct: 61  DSQNNPAKELANVQDLTVRGSKLLLLNPTDSDAAGNAVKMANQANIPVITLDRVATQGKV 120

Query: 121 ASHIASDNVAGGRMAGQLVVDMLKGQGA-VVELQGLPGASAARDRGKGFHEAVDKASGLK 179
            SH+ASDN AGG++AG  +     G+GA ++ELQG+ G SAAR+RG+GF +A   A    
Sbjct: 121 VSHVASDNRAGGKLAGDYIAQK-AGEGAKIIELQGIAGTSAARERGEGFKQAA-AAHKFT 178

Query: 180 VVASQPADFDRTKALNVMENILQAQQKIDVVFAHNDEMALGAAKAIQASGR-KIPVVGFD 238
           ++ASQPADFDRT+ LNVM+N+L A   +  VFA NDEMALGA +A+Q +G+  + VVGFD
Sbjct: 179 ILASQPADFDRTRGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKTDVVVVGFD 238

Query: 239 GTDEGVAAVNAGTLTATVAQQAGLIGEKGVETADKVLKGEKVPAFTPVELKMVTK 293
           GT +G+ AV  G L ATVAQ    IG  GVETAD VLKG +VPA  PVELK+VT+
Sbjct: 239 GTPDGIKAVQGGKLAATVAQLPEQIGAIGVETADNVLKGRQVPAINPVELKLVTR 293