Pairwise Alignments

Query, 283 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 317 a.a., putrescine ABC transporter permease PotH from Escherichia coli ECOR27

 Score =  122 bits (305), Expect = 1e-32
 Identities = 83/273 (30%), Positives = 145/273 (53%), Gaps = 19/273 (6%)

Query: 10  GEHAPILFPALMLVVFFVIPFGLMIAVSVA---RRIP---------GGFYEPDLVLANYE 57
           G    I  P + L++ F++PF ++  +S+A   R IP          G     L L N+ 
Sbjct: 28  GRKLVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFL 87

Query: 58  RFLS--AFFGGVLSFSLELAALVAVVAVGIGFPFTYRLARLPRAAQVRWLVFLLSILS-- 113
           +      +F   L  SL++AA+     + IG+P  + +A        R ++ LL IL   
Sbjct: 88  QLTDDPLYFDAYLQ-SLQVAAISTFCCLLIGYPLAWAVAH--SKPSTRNILLLLVILPSW 144

Query: 114 LSEVIIGFAWSTLLSRTAGITNLLVAVGLMAEPQSLSPSFGALLAGMVYQAFPYTVLVLY 173
            S +I  +AW  +L     + N L+ +G++ +P ++  +  A+  G+VY   P+ VL +Y
Sbjct: 145 TSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIY 204

Query: 174 PALARLDPALVEASRTLGASPLKAFFTVVVPAQRNTIVATLIMAFVFALGSYLLPQLLGR 233
            AL R+D +LVEA+  LGA PLK FFTV+VP  +  I+A  ++ F+ A+G +++P+LLG 
Sbjct: 205 TALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGG 264

Query: 234 PQHWTLSVLITDQAIYQSNMPFAAAMAVFLVLV 266
           P    +  ++  +     + P A+A+A+ ++L+
Sbjct: 265 PDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLL 297