Pairwise Alignments

Query, 265 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 271 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  135 bits (339), Expect = 1e-36
 Identities = 77/242 (31%), Positives = 127/242 (52%)

Query: 8   LMAGLIGLVLAAPILVVAGVSLNAKRSLDFPPKGLSLAWYAEVFTDPGWRGALVASLVVA 67
           L   LI L L  PIL +  +S  + + L FPP G +L WY + F++P W  A ++S  VA
Sbjct: 18  LTTALIALFLLLPILFIVLLSFGSSQWLVFPPPGWTLKWYQQFFSNPDWMAAAMSSFKVA 77

Query: 68  ASSAALAVAIAFPLAWFIWRWRAPWARAFEVLGMAPFILPPVITALGFLSFWSTFGQYGE 127
             +   +VA+  P A+ + R R P       +   P I+P VI A+   + +   G  G 
Sbjct: 78  ILTTLASVALGLPTAFALVRGRFPGRDFLYGVFTLPMIVPLVIIAVAVYALFLKLGYTGT 137

Query: 128 PWTVVVSHAVFFVTLPLVTLSLGFGAVDRSFVEAASTMGADDRTVLRTVVMPLVRPYMIS 187
            ++ VVSH +  +   ++++       D+S  +AA   GA     +  V  P +RP M++
Sbjct: 138 LFSFVVSHVIVALPFTIISIINSLKLFDQSIEDAAVICGASRLQAIYKVTFPGIRPGMMA 197

Query: 188 GFAFAFVLSLNEYIVAYMVAGFTLETLPIKIFNALRYGYTPTMAAVTVLFVLLTATIFGL 247
           G  FAF++S +E +++ M+A  TL+TLP+K++  LR   TP +A  + L + L+  I  +
Sbjct: 198 GALFAFLVSWDEVVLSVMMASPTLQTLPVKMWTTLRQDLTPVIAVASTLLIALSVLIMFI 257

Query: 248 IA 249
            A
Sbjct: 258 AA 259