Pairwise Alignments

Query, 265 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 278 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  116 bits (291), Expect = 4e-31
 Identities = 67/242 (27%), Positives = 122/242 (50%)

Query: 3   RWLNSLMAGLIGLVLAAPILVVAGVSLNAKRSLDFPPKGLSLAWYAEVFTDPGWRGALVA 62
           RW + +++  + + L +PILVV  +S N++    +P  G+SL WY +    P W  AL  
Sbjct: 16  RWAHVVLSVAVLVFLISPILVVMPLSFNSQPYFTYPMPGVSLRWYQDFLNSPEWMLALKN 75

Query: 63  SLVVAASSAALAVAIAFPLAWFIWRWRAPWARAFEVLGMAPFILPPVITALGFLSFWSTF 122
           +L+V   S  LA  +    +  +   R         + ++P I+P +ITA+G    +S F
Sbjct: 76  TLIVGVVSTLLATTLGVMASLGLTHPRLKGRALITGILVSPMIVPLIITAVGVYFAFSPF 135

Query: 123 GQYGEPWTVVVSHAVFFVTLPLVTLSLGFGAVDRSFVEAASTMGADDRTVLRTVVMPLVR 182
           G       ++++HA   V   +VT++      + +   A  ++GA    V   V +P++ 
Sbjct: 136 GLVNSLTGLILAHAALGVPFVVVTVTATLAGFNETLSRAGRSLGASPMRVFMQVKLPIIA 195

Query: 183 PYMISGFAFAFVLSLNEYIVAYMVAGFTLETLPIKIFNALRYGYTPTMAAVTVLFVLLTA 242
           P +ISG  FAF  S +E +VA  + G    T+P +++  +R   +PT+ AV  + V+++ 
Sbjct: 196 PGVISGALFAFATSFDEIVVALFLTGTDQRTVPRQMWAGIREQLSPTILAVASVLVVIST 255

Query: 243 TI 244
            +
Sbjct: 256 LL 257



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 13/188 (6%)

Query: 77  IAFPLAWFIWRWRAPWARAFEVLGMAPFILPPVITALGFLSFWSTFGQYGEPWTVVVSHA 136
           ++FP    IW     WA     + +  F++ P++  +        +  Y  P  V +   
Sbjct: 2   LSFPAYVTIWGRLGRWAHVVLSVAVLVFLISPILVVMPLSFNSQPYFTYPMP-GVSLRWY 60

Query: 137 VFFVTLPLVTLSLGFGAVDRSFVEAASTMGADDRTVLRTVVMPLVRPYMISGFAFAFVLS 196
             F+  P   L+L     +   V   ST+ A    V+ +  + L  P  + G A    + 
Sbjct: 61  QDFLNSPEWMLAL----KNTLIVGVVSTLLATTLGVMAS--LGLTHP-RLKGRALITGIL 113

Query: 197 LNEYIVAYMV--AGFTLETLPIKIFNALRYGYTPTMAAVTVLFVL--LTATIFGLIARFG 252
           ++  IV  ++   G      P  + N+L  G     AA+ V FV+  +TAT+ G      
Sbjct: 114 VSPMIVPLIITAVGVYFAFSPFGLVNSLT-GLILAHAALGVPFVVVTVTATLAGFNETLS 172

Query: 253 DLPRLLGA 260
              R LGA
Sbjct: 173 RAGRSLGA 180