Pairwise Alignments

Query, 558 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 807 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  239 bits (610), Expect = 3e-67
 Identities = 146/367 (39%), Positives = 217/367 (59%), Gaps = 3/367 (0%)

Query: 193 SLLLLAISVGIGIWVSRGMSRPLLAIRDVLGRIGGGDLTAAVPHADRPDEIGDMARAVAG 252
           +++ L ++V +   ++R +  PL A+   +  +  G+ T  +P  +R DEIG MA+A+  
Sbjct: 302 AIIALGLAVLLSWLIARSIVTPLSAMTGAMTELSKGNKTVDIPARERTDEIGAMAQAMEI 361

Query: 253 LA--TTLQGARDESQRADLERAARDLQRERLSVRAAEFARAMDEVVATLSTTTVALHERT 310
               T         Q A   +A  D ++  L   A  F  ++ +VV T+++    L   +
Sbjct: 362 FKENTLKMDKMQAEQEAQKVKAEAD-RKAALHHMADTFEESVGKVVQTVTSAATELQGAS 420

Query: 311 AALTNDAASTTDEAHAAAGAAQGASDSVESAAQASEELRGSIAAISRQVESAAQTASRAV 370
           + +   A  T+ +A   A AA  AS +VE+ A A+EEL  SI+ I++QVE +   A+RA 
Sbjct: 421 SQMAGTAHETSAQATTVASAATQASANVETVAAATEELAASISEIAKQVERSQAVANRAE 480

Query: 371 TETSNTTGIVTGLASAAEQIGAVVELINSIAGQTNLLALNATIEAARAGEAGKGFAVVAS 430
            E  NTT  V  L+    +IG VV LIN IA QTNLLALNATIEAARAG+AGKGFAVVA+
Sbjct: 481 QEAENTTNQVRALSDNVGRIGEVVVLINDIAAQTNLLALNATIEAARAGDAGKGFAVVAN 540

Query: 431 EVKSLATQTAKATEDIQSQVGAIRAATANAIGAIESIASLITNLSALNGEVASAVQQQEA 490
           EVK+LA QTAKAT++I SQ+ A++  T NA+ AI++I+ +I+ +  ++  VASAVQ+Q A
Sbjct: 541 EVKNLANQTAKATDEIASQIKAVQEGTGNAVKAIDTISKVISEMGEISASVASAVQEQTA 600

Query: 491 ATHQIFANARAAADNSRRVTSSVGSLSSTMTTTSERMRLVSTSVESVSGQSERLKDEVRR 550
           AT +I  N   AA  +  V+S++ S+      T      +S S   +S Q+E L+ EV R
Sbjct: 601 ATGEIARNVEQAAAGTAEVSSNINSVEQAARETGHAAEQISESATDLSKQAEFLRGEVGR 660

Query: 551 FVAEVNA 557
           F+ +V A
Sbjct: 661 FLHQVRA 667



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 37/219 (16%)

Query: 217 AIRDVLGRIGG-----GDLTA-----AVPHADRPDEIGDMARAVAGLATTLQGARDESQR 266
           A+ D +GRIG       D+ A     A+         GD  +  A +A  ++   +++ +
Sbjct: 492 ALSDNVGRIGEVVVLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKNLANQTAK 551

Query: 267 ADLERAARDLQRERLSVRAAEFARAMDEVVATL----STTTVALHERTAALTNDAASTTD 322
           A  E A++    +  +  A +    + +V++ +    ++   A+ E+TAA T + A   +
Sbjct: 552 ATDEIASQIKAVQEGTGNAVKAIDTISKVISEMGEISASVASAVQEQTAA-TGEIARNVE 610

Query: 323 EAHAAAGAAQGASDSVESAAQAS------------------EELRGSIAAISRQVESAAQ 364
           +A A         +SVE AA+ +                  E LRG +     QV   A 
Sbjct: 611 QAAAGTAEVSSNINSVEQAARETGHAAEQISESATDLSKQAEFLRGEVGRFLHQVR--AD 668

Query: 365 TASRAVTETSNTTGIVTGLASAAEQIGAVVELINSIAGQ 403
            A   + E  N   + TG +S       + + +N   G+
Sbjct: 669 KADMRILEWEN--ALNTGESSIDRHHREMFDQVNRFYGE 705