Pairwise Alignments

Query, 558 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 561 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  266 bits (681), Expect = 1e-75
 Identities = 156/370 (42%), Positives = 224/370 (60%), Gaps = 8/370 (2%)

Query: 193 SLLLLAISVGIGIWVSRGMSRPLLAIRDVLGRIGGGDLTAAVPHADRPDEIGDMARAVAG 252
           +L+ L ++V  G+ +   ++ P++A+   + R+ GGD    VP   R DE+G MA AV  
Sbjct: 196 ALISLLVAVAAGLVLRGSIATPIVAMTAAMARLAGGDRAVEVPGVGRRDEVGAMAEAV-- 253

Query: 253 LATTLQGARDESQRADLERAARDLQRERLSVRAAEFARAMD----EVVATLSTTTVALHE 308
                +    E+ R    + A +  + R + R  E  RA +     VV +LS     + +
Sbjct: 254 --DVFKRNAIEADRLSAAQRAEEEAKARRAARLEELMRAFEGNVTAVVQSLSGAATQMQQ 311

Query: 309 RTAALTNDAASTTDEAHAAAGAAQGASDSVESAAQASEELRGSIAAISRQVESAAQTASR 368
              ALT+ A  T  ++   A AA+ AS +V++ A A+EEL  SIA I RQV  + + A +
Sbjct: 312 SAGALTSTADETNRQSTTVASAAEQASANVQTVAAAAEELSSSIAEIGRQVTQSTRVAEQ 371

Query: 369 AVTETSNTTGIVTGLASAAEQIGAVVELINSIAGQTNLLALNATIEAARAGEAGKGFAVV 428
           AV+  +   G+V+GLA  A++IG VV+LIN+IA QTNLLALNATIEAARAGEAGKGFAVV
Sbjct: 372 AVSGANRANGVVSGLADGAQKIGEVVDLINNIAAQTNLLALNATIEAARAGEAGKGFAVV 431

Query: 429 ASEVKSLATQTAKATEDIQSQVGAIRAATANAIGAIESIASLITNLSALNGEVASAVQQQ 488
           ASEVKSLA QTAKATEDI  Q+  I+ AT  A+ AIE I  +IT +S ++  +ASAV+QQ
Sbjct: 432 ASEVKSLANQTAKATEDITGQIATIQGATREAVSAIEEIGRIITEISQISATIASAVEQQ 491

Query: 489 EAATHQIFANARAAADNSRRVTSSVGSLSSTMTTTSERMRLVSTSVESVSGQSERLKDEV 548
            AAT +I  N + AA  +++VTS++  ++     T      V +  + ++G+S RL+ EV
Sbjct: 492 SAATQEISRNVQEAAQGTQQVTSNIVGVTRAAGDTGRAAGEVRSVADHLTGESTRLRQEV 551

Query: 549 RRFVAEVNAA 558
             F+  V AA
Sbjct: 552 ESFLNGVKAA 561



 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 79/371 (21%), Positives = 139/371 (37%), Gaps = 63/371 (16%)

Query: 237 ADRPDEIGDMARAVAGLATTLQGARDES----QRADLERAARDLQRERLSVRAAEFARAM 292
           AD P +   +       AT  +   D+      +AD    AR ++ + L   A +  RA+
Sbjct: 103 ADNPQQQARLEELRRHAATWRETVADKEIALMSKADTREEARAMEAKALGKSAMDSIRAL 162

Query: 293 DEVVATLSTTTVALHERTAALTNDAASTTDEAHAAAGAAQGASDSVESAAQASEELRGSI 352
              +           ER      DA   T  +     A  GA  S+  A  A   LRGSI
Sbjct: 163 VRQIEDA--------ERALLTARDAEQKTAFSTGYLTAIAGALISLLVAVAAGLVLRGSI 214

Query: 353 AAISRQVESAAQTASRAVTETSNTTGIVTGLASAAEQIGAVVELI-----NSIAGQTNLL 407
           A         A TA+ A     +    V G+    +++GA+ E +     N+I       
Sbjct: 215 A-----TPIVAMTAAMARLAGGDRAVEVPGV-GRRDEVGAMAEAVDVFKRNAIEADRLSA 268

Query: 408 ALNATIE-----AARAGEAGKGF-----AVV------ASEVKSLATQTAKATEDIQSQVG 451
           A  A  E     AAR  E  + F     AVV      A++++  A       ++   Q  
Sbjct: 269 AQRAEEEAKARRAARLEELMRAFEGNVTAVVQSLSGAATQMQQSAGALTSTADETNRQST 328

Query: 452 AIRAATANAIGAIESIASLITNLSALNGEVASAVQQQEAATHQIFANARAA-------AD 504
            + +A   A   ++++A+    LS+   E+   V Q      Q  + A  A       AD
Sbjct: 329 TVASAAEQASANVQTVAAAAEELSSSIAEIGRQVTQSTRVAEQAVSGANRANGVVSGLAD 388

Query: 505 NSRRVTSSVGSLSS--------TMTTTSERMR---------LVSTSVESVSGQSERLKDE 547
            ++++   V  +++         +  T E  R         +V++ V+S++ Q+ +  ++
Sbjct: 389 GAQKIGEVVDLINNIAAQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTAKATED 448

Query: 548 VRRFVAEVNAA 558
           +   +A +  A
Sbjct: 449 ITGQIATIQGA 459