Pairwise Alignments

Query, 436 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 423 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 86/330 (26%), Positives = 144/330 (43%), Gaps = 26/330 (7%)

Query: 5   LSLIGAAVAAFLGSS---AQAETLSIATVNNGDMIRMQKLSEHFTKAHPDITLNWVTLEE 61
           L  +GA+ A  L ++   AQ ET++I + N      ++   E F K +PDI +    L  
Sbjct: 3   LKFLGASTALLLLAAPAFAQTETVTIWSWNVAASA-LKSTVEGFNKQNPDIKIVVEDLGN 61

Query: 62  NVLRQRVTTDIAAKG-GQYDILTIGTYEVPI-WTK-QKWLMPLTKLGANYDVEDLLPSI- 117
           N +  +     AA G G  DI+T+  +E  + W++       LT+LG   + + L P   
Sbjct: 62  NQVFDKTLAACAAGGDGLPDIVTVENFEAELFWSRFPDCFANLTELGYTPEKQALFPDFK 121

Query: 118 RSGLTTDGTLYAAPFYGESSMVMYRKDLFEKAGLTMPEAPTWAFVSDAARKLTDKKAEVY 177
           R+ L  DG  YA P+      V YR+D +EKAG+      +W     A +K+        
Sbjct: 122 RTELEVDGVAYAVPWDSGPVAVFYRRDFYEKAGVDPATIKSWDDFIAAGKKVMAANPGT- 180

Query: 178 GICLRGKAGWGENMAFLSAMANSFGASWFDMNWKPQFNTDPWKQTLTTYLGLMKDAGPPG 237
              +  +A +  +  +   +AN  G  +F  + +      P        +  MKDAG   
Sbjct: 181 ---VMAQADFNGDSEWFRMIANEQGCGYFSTDGQNITINKPACVATLEKVKEMKDAGIIT 237

Query: 238 ASSNGFNENLALFQSGKCA-----MWIDATVAASFVSNPAQSKVADKVGYALAPD-TGLG 291
           A+   ++E +    +GK A      W + TV +          ++ K G  L P  T  G
Sbjct: 238 AAI--WDEKIQANTAGKAASQMYGAWYEGTVRS------GSPDLSGKWGVYLMPSLTADG 289

Query: 292 KRSNWLWAWSLAVPASSKKGDAAQAFISWA 321
             +  L   SLA+ ++S++ +AA  +I +A
Sbjct: 290 PHAANLGGSSLAISSTSQRKEAAWKYIDYA 319