Pairwise Alignments

Query, 582 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  394 bits (1012), Expect = e-113
 Identities = 212/380 (55%), Positives = 267/380 (70%), Gaps = 7/380 (1%)

Query: 203  AERERVEAALRQSQKMEAMGQLTGGIAHDFNNLLQALSSCLQLVGRRAKE-PSIQPLLET 261
            A   + E  LRQSQKMEA+GQLTGG+AHDFNNLLQA+SSCLQLV RR    P ++P+L+ 
Sbjct: 894  ATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQLVSRRVGHAPEVEPILDA 953

Query: 262  GQQAIDRGAKLVQQLMAFARRQTLRPEPMDVRDRLLGMADLLTRAIRADITLETQVEPGL 321
            G+QA+DRGA L++QLMAF+RRQ+L+PE  DVRDRLLG+   L RA+RADI LE  ++ GL
Sbjct: 954  GRQAVDRGASLIRQLMAFSRRQSLQPEAFDVRDRLLGLRLFLDRALRADIGLEFALQGGL 1013

Query: 322  WPVEVDPTQFELAILNLAVNARDAMPEGGRLRVTARNRLADGA---SGDLVQVTVSDTGT 378
            WPV  DP QF+LA+LNLA NARDA+   G + V A N + DG    SG+ ++V V D+G 
Sbjct: 1014 WPVMADPVQFDLAVLNLATNARDAIDADGAVVVGADNVVLDGMDGLSGEFLKVFVRDSGR 1073

Query: 379  GMEAEVKARVFEPFFTTKEVGKGSGLGLAQVYGFTRQSSGRVEIDSAPGQGTAVSLFLPR 438
            G+  +   RVFEPFFTTK VGKG+GLGLAQVYGF RQS G   ++S  G+GT VSL LPR
Sbjct: 1074 GIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQSGGTATVESVEGKGTVVSLLLPR 1133

Query: 439  TVKPVAAHAKERSLDTARGAGRRLLLVEDDPIVGSMVAAALDEMGYAVLRAGNAEEALGL 498
                VA+            A   +LLVEDDP+V  +V AAL+++GY V RA   EEAL  
Sbjct: 1134 AEATVASETPNAPPVLPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEEALRR 1193

Query: 499  LNDRDLRIDILFSDVVMPGAMNGIDLAHTARRLRPGLPVVLTTGYSEDIARIDGVRVLPK 558
            L   +  +D+LFSDVVMPG++NG+ LA  AR+  P L ++LTTGYSED+A    VRVL K
Sbjct: 1194 L--EEAAVDLLFSDVVMPGSINGVALAQEARQRWPDLGILLTTGYSEDLAATKSVRVLSK 1251

Query: 559  PYRVGELAELLESALGADGA 578
            PYR+ +LA  ++  L  DGA
Sbjct: 1252 PYRIEDLAHAIQEEL-EDGA 1270



 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 113/441 (25%), Positives = 174/441 (39%), Gaps = 71/441 (16%)

Query: 194 ANRALNAEIAERERVEAALRQSQKMEAMGQLTGGIAHDFNN----LLQALSSCLQL--VG 247
           A    NAE  E ER  A +  ++   A        +H+F      +L  +   LQ     
Sbjct: 322 ATAITNAEAYEEERRRAEML-AELDRAKTAFFSNASHEFRTPLTLMLGPVEDMLQRSPAE 380

Query: 248 RRAKEPSIQPLLETGQQAIDRGAKLVQQLMAFAR----RQTLRPEPMDVRDRLLGMADLL 303
            RA  P  +  LE   +   R  +LV  L+  +R    R   R EP+D+      +A   
Sbjct: 381 DRAAVPVERDALELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSF 440

Query: 304 TRAI-RADITLETQVEPGLWPVEVDPTQFELAILNLAVNARDAMPEGGRLRVTARNRLAD 362
             A+ RA +       P   PV +D   +E  +LNL  NA      GG         +A 
Sbjct: 441 RSAMDRAGLDYRIDCPPLPEPVWIDRDLWEKIVLNLISNAFKYTLSGGVA-------VAV 493

Query: 363 GASGDLVQVTVSDTGTGMEAEVKARVFEPFFTTK----EVGKGSGLGLAQVYGFTRQSSG 418
              G+   +TV DTG G+ AE + RVF+ F   +       +G+G+GLA V   T+   G
Sbjct: 494 QPVGERAVLTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLALVKDLTQLHGG 553

Query: 419 RVEIDSAPGQGTAVSLFLP----------RTVKPVAAHAKERS----------------- 451
            V +DS  G+G+  ++ LP          R   P+ A    R+                 
Sbjct: 554 TVALDSDVGRGSTFTVTLPFGNAHVPATERPAGPIPASTATRADAFVAEALHWLPQEQGE 613

Query: 452 ------LDTA-------RGAGRRLLLVEDDPIVGSMVAAALDEMGYAVLRAGNAEEALGL 498
                 +D A       R     +LL +D+  + S V   L   GY V   G+   A+  
Sbjct: 614 QSAPALVDGASSGPAPERMRNATILLADDNADMRSYVERLLTAAGYRVETVGDGVAAVE- 672

Query: 499 LNDRDLRIDILFSDVVMPGAMN-GIDLAHTARRLRPGLPVVLTTGYSEDIARIDGVRV-- 555
              +    D++ SDV+MP     G+  A         LP++L +  + + + I+G++   
Sbjct: 673 -TAKAAPPDLVLSDVMMPHLDGFGVIAALRGHPHTRDLPIILLSARAGEESSIEGLQAGA 731

Query: 556 ---LPKPYRVGELAELLESAL 573
              L KP+   EL   +E AL
Sbjct: 732 DDYLVKPFSARELLARVEGAL 752