Pairwise Alignments

Query, 330 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 318 a.a., galactofuranose ABC transporter substrate-binding protein YtfQ from Escherichia coli ECRC98

 Score = 89.7 bits (221), Expect = 8e-23
 Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 22/310 (7%)

Query: 24  ALGGALGGVAFAADTVKLGVSIPAATHGFTGGIVWWANQAKAELEKAHPNLKITVKTASG 83
           A+  A+  +A AA  + +G S   +  G+        N AK+E EK      IT+K A G
Sbjct: 10  AVSAAMSSMALAAP-LTVGFSQVGSESGWRAAET---NVAKSEAEKRG----ITLKIADG 61

Query: 84  APEQANQLQDLVTVTK--IDSLVIFPFESAALTQPVMQAKKKNVYVTVVDRGLT--DPSA 139
             +Q NQ++ + +     +D++ I P  +      + +AK   + V ++DR +   D S 
Sbjct: 62  QQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSL 121

Query: 140 QDAYIAGDNTAFGRIPAEYIAKKYNGK-ANIVALRG-IPTTLDNERWEAFTGVLKQYPDI 197
               +  DN   G++  +++ K+ NGK  N+V L+G +  ++  +R + F   +K  P+I
Sbjct: 122 YMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPNI 181

Query: 198 KILDGKYANWNRDDAFKVTQDFL---TRFKDIDVVWAADDDMAFGVLKAIEQAKRTDIKE 254
           KI+  +  ++ R    +V + F+      K+I +V+A +DDM  G ++AI++A     K+
Sbjct: 182 KIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKD 241

Query: 255 VFGGA--GSKTMVKTILDGSNPLIRADVSYSPKFIYDAIKMTAEARLKGDKLPATYIIPS 312
           +  G+  G   + K ++DG      A V  +P     A     + +  G       +  S
Sbjct: 242 ILTGSIDGVPDIYKAMMDGE---ANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKS 298

Query: 313 ALITKENAKE 322
            L   + AKE
Sbjct: 299 TLYLPDTAKE 308