Pairwise Alignments

Query, 330 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Dickeya dianthicola ME23

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 14/301 (4%)

Query: 19  MAATVALGGALGGVAFAADTVKLGVSIPAATHGFTGGIVWWANQAKAELEKAHPNLKITV 78
           + + VAL  A+   A A DT+ L VS     + F    V   + A+ E +K   NL I  
Sbjct: 9   LVSAVALSAAVSANALAKDTIALVVS--TLNNPF---FVSLKDGAQKEADKLGYNLVILD 63

Query: 79  KTASGAPEQANQLQDLVTVTKIDSLVIFPFESAALTQPVMQAKKKNVYVTVVDRGLTDPS 138
              + A E +N +QDL TV     L+I P +S A+   V  A +  + V  +DR +    
Sbjct: 64  SQNNPAKELSN-VQDL-TVRGTKLLLINPTDSNAVGNAVKLANQAKIPVITLDR-VAASG 120

Query: 139 AQDAYIAGDNTAFGRIPAEYIAKKYNGKANIVALRGIP-TTLDNERWEAFTGVLKQYPDI 197
              +++A DN   G++  ++IAKK    A ++ L G+  T+   ER   F    ++    
Sbjct: 121 EVISHVASDNAFGGKVAGDFIAKKLGEGAKVIQLEGLAGTSAARERGAGFIKSAEK-NKF 179

Query: 198 KILDGKYANWNRDDAFKVTQDFLTRFKDIDVVWAADDDMAFGVLKAIEQAKRTDIKEVFG 257
            +L  + A+++R     V Q+ LT   D+  V+A +D+MA G L+A++ A R D+  V G
Sbjct: 180 AMLASQPADFDRTKGLNVMQNLLTAHPDVKAVFAQNDEMALGALRALQTAGRDDVL-VVG 238

Query: 258 GAGSKTMVKTILDGSNPLIRADVSYSPKFIYDAIKMTAEARLKGDKLPATYIIPSALITK 317
             G+   VK +  G    + A V+  P+ I      TA+  LKG+K+     +   L+TK
Sbjct: 239 FDGTADGVKAVEGGK---LAATVAQRPEQIGIIGVETADKVLKGEKVQPIIPVDLKLVTK 295

Query: 318 E 318
           +
Sbjct: 296 Q 296