Pairwise Alignments

Query, 446 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Azospirillum sp. SherDot2

Subject, 441 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas sp. SVBP6

 Score =  538 bits (1386), Expect = e-157
 Identities = 277/440 (62%), Positives = 345/440 (78%), Gaps = 6/440 (1%)

Query: 8   PLKVLIVEDDPNVSLGCQQALELEDIPTEAVDSAEKARRLVAEGFPGIVVTDIRLPGMDG 67
           PL VLIVEDDP+V LGCQQAL LEDI  E V SAE+A + + + F GIVV+DIRLPG+DG
Sbjct: 5   PLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEEALQRIGDDFAGIVVSDIRLPGIDG 64

Query: 68  MALLAELLASDPDLPVVLMTGHGDVSMAVQAMKLGAHDFIEKPFSPDYLVEVVRRALDKR 127
           + LL+ L A D  LPVVL+TGHGD+ MAV AM+ GA+DF+EKPF+P+ LVEVVRRAL++R
Sbjct: 65  LELLSRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFAPERLVEVVRRALEQR 124

Query: 128 RLTLEVRDLRARLQNRDSIEARLVGGSPQMARVRRLIGDLASSAADVLIHGETGSGKELA 187
            L+ EV  LR +L  + ++E R++G SP M  +R LI ++A ++A+VLI GETG+GKEL 
Sbjct: 125 GLSREVFALRRQLAGQSTLEGRIIGRSPAMQNLRELIANVADTSANVLIEGETGTGKELV 184

Query: 188 ARCLHDASPRRGGNFVAINCGGLPESLIDSEIFGHEAGAFTGAGKRRVGKVEHASGGTLF 247
           ARCLHD S R+G  FVA+NCGGLPE+L +SEIFGHEA AFTGAGKRR+GK+EHA+GGTLF
Sbjct: 185 ARCLHDFSRRQGAPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLF 244

Query: 248 LDEIESMPMPVQIKFLRVLQERTLERLGSNTPVHVDCRVIAATKVDLRELADRGQFRADL 307
           LDE+ESMP+ +QIK LRVLQERTLERLGSN  + VDCRVIAATK DL  L   GQFR+DL
Sbjct: 245 LDEVESMPLNLQIKLLRVLQERTLERLGSNQSIAVDCRVIAATKSDLNALGHSGQFRSDL 304

Query: 308 YYRLNVANLPLPPLRDRREDIPLLFEQFTLQAAARHGRPVPPPDAERMRRLMAYDWPGNV 367
           YYRLNV  L LPPLR+RREDI  LFE F  Q++ R  R  P  D++ + RLMA+DWPGNV
Sbjct: 305 YYRLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRETPQLDSQTLSRLMAHDWPGNV 364

Query: 368 RELHNVADRCVLGIEQGFPPFATSHPAANRPL--AQAVEAFERALIADTLRRTDHSLARA 425
           REL NVA+R  LG+    P F  +  +AN+ L  A+AVEAFER L++D L+RT  +L++A
Sbjct: 365 RELRNVAERYALGL----PAFKKAGASANQGLGFAEAVEAFERNLLSDALQRTGGNLSQA 420

Query: 426 AEELQVAKTTLHDKIRKYGL 445
           ++EL +AKTTL DK++KYGL
Sbjct: 421 SQELGMAKTTLFDKVKKYGL 440