Pairwise Alignments

Query, 545 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 814 a.a., PAS domain S-box protein from Paraburkholderia sabiae LMG 24235

 Score =  271 bits (692), Expect = 9e-77
 Identities = 173/408 (42%), Positives = 237/408 (58%), Gaps = 23/408 (5%)

Query: 145 SRLEERIAERTQALQAEMADRRRAEEQLHQAQKMEALGQLTGGVAHDFNNLLQGIVSCLA 204
           +++   I ER QA  AE+ D+ R    L Q+QKMEALG+LTGGVAHDFNN+LQ +   L 
Sbjct: 281 AKITRDITERRQA--AELLDQTR--NALFQSQKMEALGKLTGGVAHDFNNVLQVLRGNLE 336

Query: 205 VLAPTVPDGTPRELFEAANRSIERGARLTQSLLSFARRQTLMPEPTDLGELLTGMSSLLE 264
           +L     D   R     A  ++ERG++L   LL+F RRQ L P P+ LG++L  M  LL 
Sbjct: 337 LLGARHDDAWSRSRIGRAIEAVERGSKLASQLLAFGRRQALQPVPSSLGDVLHNMEDLLR 396

Query: 265 RSLGGQISVTIQVPSG--LPAALIDRAQLESAILNLAINARDAMPSGGRLSLTASVAQIG 322
           R+LG ++ V I    G  L   L+D  QLE+ +LNLAIN+RDAMP GG L+   S A + 
Sbjct: 397 RALGERVRVRIHEARGGELWNVLVDTHQLENVLLNLAINSRDAMPEGGMLTFGLSNAVL- 455

Query: 323 DGETGRPAAGPAELRAGTYVAIRVADTGTGIDPAVLPHVFEPFFTTKPLDKGSGLGLSMV 382
           D +T    A  A++  G YV + V DTGTG+   V    F+PFFTTKP  +G+GLGLSM 
Sbjct: 456 DAQT----AVTAQIDPGEYVKMTVTDTGTGMSADVAERAFDPFFTTKPEGQGTGLGLSMA 511

Query: 383 QGMATQSGGGVHIDSSLGGGTAITLYLP-----SVAAVTGPPARLAADVERGEGRTVLLV 437
            G   QSGG + + S+ G GT +T+YLP      VA    P      D  RG+  TVL+V
Sbjct: 512 YGFVLQSGGHIELASTPGVGTTVTIYLPRSTDTPVARAASPAEPQTGDDLRGD-ETVLVV 570

Query: 438 EDDAIVRMGTMALLESQGHHVIEADSGETALALLQDGAEIDALVTDFAMPG-MNGAEVVR 496
           EDD  V++  + LL   G+ V+ A+    AL +L+ GA++D L +D  MPG +   E+ R
Sbjct: 571 EDDRRVQLTVVDLLSQLGYGVLTANDATEALTVLRSGAKVDLLFSDVVMPGPLLSPEMAR 630

Query: 497 TVRTLRPGLPALIVTGYA-DTPDLGEAVR----LLRKPFSPNQIAEQL 539
               +RP L  L  +G+  DT  L   +R    LL+KP+S  Q+A ++
Sbjct: 631 QALLMRPSLKVLFTSGHTRDTMGLDAQLRRGADLLQKPYSRMQLARKI 678



 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 4/111 (3%)

Query: 434 VLLVEDDAIVRMGTMALLESQGHHVIEADSGETALALLQDGAEIDALVTDFAMPGMNGAE 493
           +L+VEDD   R     LL   GH      + E AL  LQ     D L+TD  +PGM+G +
Sbjct: 703 ILIVEDDRDARDALCELLAMLGHTFEAVGNAEEALQRLQLHP-FDVLLTDLTLPGMSGFD 761

Query: 494 VVRTVRTLRPGLPALIVTGY-ADTPD--LGEAVRLLRKPFSPNQIAEQLAA 541
           + R    LR     +  +G  A T D  L      LRKP+S +Q+   L A
Sbjct: 762 LARAAIALRAAQRVVFSSGLDAQTSDTTLPFEWTALRKPYSLDQLKAALDA 812