Pairwise Alignments

Query, 545 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 872 a.a., GAF domain-containing protein from Bosea sp. OAE506

 Score =  282 bits (722), Expect = 3e-80
 Identities = 198/530 (37%), Positives = 277/530 (52%), Gaps = 74/530 (13%)

Query: 23  VLADIGLAMQPCADLPELCRRLGDDVGALMLSEGVLTDIDPLTAWLEAQPR-WSDLPIVI 81
           VL DI   ++P      L   L   +   ++  G+LT    L A   A+PR W+D  + +
Sbjct: 402 VLHDIRAELEPAEAATFLNIGLAATICMPLVKRGLLT---ALMAIHNARPRRWTDDDLAL 458

Query: 82  LTSRRSRQAGRGRQAFFQSLGNVTLLDRPLHREALQSAAQAALRSRERQYRTRSHLHEIT 141
           LT    R                       H E ++S  +A++R  E+++R         
Sbjct: 459 LTEVTERCWA--------------------HIERVRS--EASVREGEKRFR--------- 487

Query: 142 QASSRLEERIAERTQALQAEMADRRRAEEQLHQAQKMEALGQLTGGVAHDFNNLLQGIVS 201
                LE ++AERTQALQ              Q QKMEA+G LTGG+AHDFNNLL  ++ 
Sbjct: 488 ---EELEAKVAERTQALQ--------------QVQKMEAVGNLTGGIAHDFNNLLMAVIG 530

Query: 202 CLAVLAPTVP-DGTPRELFEAANRSIERGARLTQSLLSFARRQTLMPEPTDLGELLTGMS 260
            L +L   +P D     L + A    +RG+ LTQ +L+FARRQ L  E TD  +L+ GM 
Sbjct: 531 SLELLRKRMPADQALLRLLDNAMEGAKRGSSLTQRMLAFARRQELRTERTDAVKLVQGMQ 590

Query: 261 SLLERSLGGQISVTIQVPSGLPAALIDRAQLESAILNLAINARDAMPSGGRLSLTASVAQ 320
            L++RSLG  +++ +++P  LPA  +D  QLE+A+LNLA+NARDAMP GG + + A   Q
Sbjct: 591 DLIQRSLGPMVNLRVRLPKSLPAIEVDGNQLEAALLNLAVNARDAMPDGGTIIIEAK--Q 648

Query: 321 IGDGETGRPAAGPAELRAGTYVAIRVADTGTGIDPAVLPHVFEPFFTTKPLDKGSGLGLS 380
           + D E+G+             V + V+D G G+D   L    EPFFTTK + KG+GLGLS
Sbjct: 649 VQDRESGQQR-----------VCLSVSDDGEGMDEGTLARATEPFFTTKGVGKGTGLGLS 697

Query: 381 MVQGMATQSGGGVHIDSSLGGGTAITLYLPSVAAVTGPPARLAADVERG---EGR--TVL 435
           MV G A QSGG   + S +G GT   + LP   + +     L  D  +    EGR  T+L
Sbjct: 698 MVYGFAEQSGGRFSLTSEVGRGTTAEIILPISESGSDVVPVLPTDEHKQVGLEGRRLTIL 757

Query: 436 LVEDDAIVRMGTMALLESQGHHVIEADSGETALALLQDGAEIDALVTDFAMPGMNGAEVV 495
            V+DDA+V M T  LLE  GH V+ A SG  AL  L      D ++TD AMP M GA+++
Sbjct: 758 AVDDDALVLMNTGDLLEDLGHDVVLAHSGREALDQLSQ-RRFDLVITDHAMPQMTGAQLI 816

Query: 496 RTVRTLRPGLPALIVTGYADTPDLGEA--VRLLRKPFSPNQIAEQLAAML 543
             +    P LP ++ TGYA+ P   E   V  L KPF+   +   +AA++
Sbjct: 817 SEIEARSPELPVILATGYAELPSGLEMRDVFRLSKPFAQQDLVRAIAAVV 866